Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 252 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score = 88.2 bits (217), Expect = 4e-22
 Identities = 67/206 (32%), Positives = 101/206 (49%), Gaps = 28/206 (13%)

Query: 344 TDISKKLGDFSLNVNGGQIY--QGEVVGILGPNGIGKTTFVKALAGVISPDSGEVTGD-- 399
           + ISK  GD +L V+G  +    G V  I+GPNG GK+T +  +A ++S D+G VT D  
Sbjct: 5   SQISKSYGD-TLVVDGVSVSIPAGGVTSIIGPNGAGKSTLLSIVARLMSMDTGTVTVDGL 63

Query: 400 -------------VKVSYKPQYISSDFEGTVEDLL--------MSITAIHTSYYKSEIIK 438
                        + +  +  +ISS    TV DL+             I    +    ++
Sbjct: 64  DVTKTPSETLAKRLSILRQDNHISSRL--TVRDLVGFGRYPYSKGRPTIEDKVHIDRALE 121

Query: 439 PLALENILDSSVKDLSGGELQRVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRM 498
            L LEN+    + +LSGG+ QR  +A  L QD D  L+DEP   LD++      +++RR 
Sbjct: 122 YLHLENLAGRFLDELSGGQRQRAFVAMVLCQDTDYVLLDEPLNNLDMKHASGMMKIMRRA 181

Query: 499 ADEKEAAMFVVDHDILFQDYISDRFI 524
           ADE +  + +V HDI F  + SD  I
Sbjct: 182 ADELKKTVVLVLHDINFASWYSDTII 207



 Score = 72.0 bits (175), Expect = 3e-17
 Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 23/198 (11%)

Query: 97  PRDGVTGLLGPNGVGKSTIIKALS-------GEMVLNLNDLTETPDMKKVLDYFSGTELQ 149
           P  GVT ++GPNG GKST++  ++       G + ++  D+T+TP  + +    S     
Sbjct: 25  PAGGVTSIIGPNGAGKSTLLSIVARLMSMDTGTVTVDGLDVTKTPS-ETLAKRLSILRQD 83

Query: 150 NYFE-KLKNNGIKPIHKPQYVDVLPKVVKGKVGELLKKVDEKGEFEKIINALEISNILDR 208
           N+   +L    +    +  Y    P +            ++K   ++ +  L + N+  R
Sbjct: 84  NHISSRLTVRDLVGFGRYPYSKGRPTI------------EDKVHIDRALEYLHLENLAGR 131

Query: 209 TFDQLSGGELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIREVAE--GKKVVA 266
             D+LSGG+ QR  +A    ++ D    DEP + LD+K      K++R  A+   K VV 
Sbjct: 132 FLDELSGGQRQRAFVAMVLCQDTDYVLLDEPLNNLDMKHASGMMKIMRRAADELKKTVVL 191

Query: 267 VEHDLIVLDYLSDYIHIM 284
           V HD+    + SD I  M
Sbjct: 192 VLHDINFASWYSDTIIAM 209