Pairwise Alignments

Query, 162 a.a., homoaconitase small subunit from Methanococcus maripaludis S2

Subject, 218 a.a., 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) from Variovorax sp. SCN45

 Score = 62.8 bits (151), Expect = 4e-15
 Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 20/112 (17%)

Query: 13  DDIDTDAIIPGAYLKTTDEYELASHCMAG---IDENFP-----ERVEDGDF--------- 55
           +++DTDAIIP  +LK+  +     +       +D  FP      R  + DF         
Sbjct: 17  ENVDTDAIIPKQFLKSIKKTGFGVNLFDEWRYLDAGFPGQDPKSRKPNPDFVLNQPRYAG 76

Query: 56  ---LVAGENFGCGSSREQAPIAIKYCGIKAIIVESFARIFYRNCINLGVFPI 104
              L+A +NFGCGSSRE AP A+   G +AII  S+A IF+ N    G+ PI
Sbjct: 77  ASVLLARKNFGCGSSREHAPWALDQYGFRAIIAPSYADIFFNNSFKNGLLPI 128