Pairwise Alignments

Query, 784 a.a., DNA-directed DNA polymerase from Methanococcus maripaludis S2

Subject, 790 a.a., DNA polymerase II from Dickeya dianthicola ME23

 Score =  146 bits (369), Expect = 4e-39
 Identities = 164/730 (22%), Positives = 307/730 (42%), Gaps = 96/730 (13%)

Query: 80  YQEKELSKVTVKYPNNVKTVREILMEFERLYEYDIPFVRRYLIDNSVIPTSTWDFENNKK 139
           + E +L     +Y   ++  +++      +YE DI    R+L++   I    W F   + 
Sbjct: 78  HHEPQLGLYCPQYRQLLRLEKKLQEAGIPVYEADIRPPERFLMER-FITAPVW-FSGEET 135

Query: 140 IDNKI------------PDFKTVSFDIE------VYCNKEPNPKKDPIIMASFSSKDFNT 181
            D  I            P  KTVS DIE      +YC       +  + M    + + + 
Sbjct: 136 ADGLIDNVKLKPAPDYRPSLKTVSLDIETSRHGELYCIGLEGCGQRQVFMLGPENGNADD 195

Query: 182 VVSTKKFDHEKLEYVKDEKELIKRIIEILKEYD--IIYTYNGDNFDFPYLKKRAESFGLE 239
                      LEYV    +L++++ + L  +D  +I  +N   FD   L++ AE + + 
Sbjct: 196 AGDLT------LEYVASRPQLLEKLNQWLHTHDPDVIIGWNLVQFDLRVLQQHAERYRIP 249

Query: 240 LKLGKNDEKIKITKGGMNSKSYI---PGRVHID-LYPIARRLLNLTKYRLENVTEALFDV 295
           L+LG+N ++++  + G     +    PGR+ +D +  +     N   + LE V+ AL   
Sbjct: 250 LRLGRNGQELEWREHGYRQGHFFAGAPGRLIVDGIEALKSATWNFASFSLEFVSRALLGE 309

Query: 296 KKVDVGH----ENIPKMWDNLDETLVEYSHQDAYYTQRIGEQFLPLEIMFSRVVNQSLYD 351
            K         E I + +      L  Y+ +D     RI E+   +  +  R     L  
Sbjct: 310 GKASDNPYQRLEEIEQRFQQDKPALARYNLKDCELVTRIFEKTHLMSFLLERASVTGLAA 369

Query: 352 INRMSSSQMVEYLLLKNSYKMGVIAPNRPSGKEYQKRIRSSYEGGYVKEPLKGIHEDIVS 411
                S     +L L   ++ G +APN             +  GGYV +   G+++ ++ 
Sbjct: 370 DRSGGSVAAFTHLYLPRMHRAGFVAPNLGEVPP------EASPGGYVMDSRPGLYDSVLV 423

Query: 412 MDFLSLYPSIIMSHNLSPETIDCTCCSDEENGENEEILGHKFCKKSIGIIPKTLMDLINR 471
           +D+ SLYPSII +  + P  +       +E    E   G  F ++    +P  +  + + 
Sbjct: 424 LDYKSLYPSIIRTFLIDPVGLITGLQQPDEQHAVEGFRGAWFSRRQ-HCLPAIVEGIWHE 482

Query: 472 RKKVKKVLREKAEKGEFDEEYQILDYEQRSIKVLANSHYGYLAFPMARWYSRDCAEITTH 531
           R   K+   +   +               ++K++ N+ YG L     R++    A   T 
Sbjct: 483 RDLAKQQNNQPLSQ---------------ALKIIMNAFYGVLGSSGCRFFDPRLASSITL 527

Query: 532 LGRQYIQKTIEEAENFGFKVIYADTDGFY----SKWADDKEKLSKYELLEKTREFLK--- 584
            G   +++T    E  G++VIY DTD  +        +D   L  +EL+    ++ +   
Sbjct: 528 RGHDIMRQTRSLIEAKGYQVIYGDTDSTFVWLKRPHREDDANLIGHELVAYINDWWQQHL 587

Query: 585 NINNTLPGEMELEFEGYFKRGIFVT--------KKKYA---LIDENEKITVKGLEVVRRD 633
           +  + L   +E+E+E +F R +  T        KK+YA   +  + E++  KGLE VR D
Sbjct: 588 HQQHGLTSALEMEYETHFHRFLMPTIRGAELGSKKRYAGMTITAQGEQMVFKGLETVRSD 647

Query: 634 WSNVSKNTQKNVLNALLKEGSVENAKKVIQDTIKELKDGKVNNEDLLIH-TQLTKRIEDY 692
           W+ +++  Q+ +   +      E+ ++ +++ + +  +G+   +DLL++  +L  ++ DY
Sbjct: 648 WTPLAQQFQQQLYQRIFHR---ESYQEWVREYVAKTLNGEY--DDLLVYRKRLRHKLSDY 702

Query: 693 KTTAPHVEVAKKILKSGNR-------VNTGDVISYIITSGNKSISERAEILENAKN-YDT 744
           +   P    A ++    NR         +G  ISY+IT          E LEN ++  D 
Sbjct: 703 QRNVPPQVRAARMADDYNRRHDRPLQYQSGGWISYVITVNG------PEPLENRRSPLDY 756

Query: 745 NYYIENQILP 754
           N+Y+E Q+ P
Sbjct: 757 NHYVEKQLQP 766