Pairwise Alignments

Query, 209 a.a., trimeric intracellular cation channel family protein from Methanococcus maripaludis S2

Subject, 190 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 87.0 bits (214), Expect = 2e-22
 Identities = 54/190 (28%), Positives = 95/190 (50%), Gaps = 12/190 (6%)

Query: 20  VVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIPYA-LRSPNDM----GVALIG 74
           +  AL   ++ +D +G+ +LG +TALGGG  RD+L+   P + +  P+ +    G AL  
Sbjct: 1   MTAALAAGRREMDWVGVFLLGCVTALGGGSVRDVLLGNYPLSWVAHPSYLIVTGGAALGT 60

Query: 75  VWCAIVIFKVFNEDVSNKYIIQIPDAVGLSAFTTTGAMIAYNFDVSFFGIIILATLTGVG 134
           V+ A V+  +       + +    DAVGL  FT  G  +A    +    +I    +TG  
Sbjct: 61  VFLARVMDHL-------RQVFLFLDAVGLVVFTVIGCNVAIGLGLPVIVVIAAGMITGCV 113

Query: 135 GGIISDILLQKTPSALTEDFYASCSIIGAIAFYLAILSNLSLEMSAVICSIVVLMIRIVA 194
           GG++ D+L  + P     + YA+ SI+  + +    L+ L   ++  +     L +R++A
Sbjct: 114 GGVLRDVLCNEVPLLFRAELYATVSILTGLLYVAGPLAGLPQPLTMAVAMAAGLTLRLLA 173

Query: 195 ILCKWSLPKF 204
           +   WS+PKF
Sbjct: 174 LRFGWSMPKF 183



 Score = 47.4 bits (111), Expect = 2e-10
 Identities = 20/59 (33%), Positives = 35/59 (59%)

Query: 6   IFFIMNIIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIPYALRS 64
           +F  ++ +GL+ F V+G    I  GL ++ +I  G++T   GG+ RD+L N +P   R+
Sbjct: 73  VFLFLDAVGLVVFTVIGCNVAIGLGLPVIVVIAAGMITGCVGGVLRDVLCNEVPLLFRA 131