Pairwise Alignments

Query, 209 a.a., trimeric intracellular cation channel family protein from Methanococcus maripaludis S2

Subject, 212 a.a., Putative membrane protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 90.5 bits (223), Expect = 2e-23
 Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 1/200 (0%)

Query: 4   ENIFFIMNIIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIPYALR 63
           E +  ++ +   +AFA+ G L G +  LD +G+ V+G + A GGG  RDLL++  P+   
Sbjct: 9   ETLRLLVELAATVAFALSGILMGARMRLDAVGVAVVGFLAAFGGGTLRDLLLDQRPFFWV 68

Query: 64  SPNDMGVALIGVWCAIVIFKVFNEDVSNKYIIQIPDAVGLSAFTTTGAMIAYNFDVSFFG 123
           S  ++   ++G+    + F         +  IQ PDA+GL  FT TG   A   D+    
Sbjct: 69  SHVELLWGVLGLCVLAMAFLRGRHMQLTERAIQWPDALGLGLFTATGVHQALLLDMPALV 128

Query: 124 IIILATLTGVGGGIISDILLQKTPSALTEDF-YASCSIIGAIAFYLAILSNLSLEMSAVI 182
            +++  +TGV GG++ D++  + P+A  +   YA C+  G   +           ++ V 
Sbjct: 129 AVLMGLITGVFGGVLRDVVCNEIPTAFKDHRPYALCAFAGGWLYVGLWQIEAPGWIALVA 188

Query: 183 CSIVVLMIRIVAILCKWSLP 202
           C +    +R +A+   W LP
Sbjct: 189 CVVFTAGLRGLALWRNWQLP 208



 Score = 38.1 bits (87), Expect = 1e-07
 Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 2   ITENIFFIMNIIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIPYA 61
           +TE      + +GL  F   G  + +   +  L  +++G++T + GG+ RD++ N IP A
Sbjct: 95  LTERAIQWPDALGLGLFTATGVHQALLLDMPALVAVLMGLITGVFGGVLRDVVCNEIPTA 154

Query: 62  LRSPNDMGV-ALIGVWCAIVIFKV 84
            +      + A  G W  + ++++
Sbjct: 155 FKDHRPYALCAFAGGWLYVGLWQI 178