Pairwise Alignments

Query, 209 a.a., trimeric intracellular cation channel family protein from Methanococcus maripaludis S2

Subject, 207 a.a., Putative inner membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  108 bits (270), Expect = 7e-29
 Identities = 64/201 (31%), Positives = 112/201 (55%), Gaps = 4/201 (1%)

Query: 6   IFFIMNIIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIP-YALRS 64
           + + ++I+G   FA+ G L   K  +D  G++VLG++TA+GGG  RD+ ++  P + ++ 
Sbjct: 2   LVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDNGPVFWVKD 61

Query: 65  PNDMGVALIGVWCAIVIFKVFNEDVSNKYIIQIPDAVGLSAFTTTGAMIAYNFDVSFFGI 124
           P D+ VA++     I++ +        K+++ + DAVGL+ F   G   A+  +      
Sbjct: 62  PTDLVVAMVTSMLTILLVRQPRR--LPKWMLPVLDAVGLAVFVGIGVNKAFLAETGPLVA 119

Query: 125 IILATLTGVGGGIISDILLQKTPSALTEDFYASCSIIGAIAFYLAILS-NLSLEMSAVIC 183
           + +  +TGVGGGII D+L ++ P  L  + YA+  IIG I    A  + ++ LE ++++ 
Sbjct: 120 VCMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIVHATAFYTFSVPLESASMMG 179

Query: 184 SIVVLMIRIVAILCKWSLPKF 204
            +V L IR+ AI     LP F
Sbjct: 180 MVVTLFIRLAAIRWHLKLPTF 200