Pairwise Alignments

Query, 209 a.a., trimeric intracellular cation channel family protein from Methanococcus maripaludis S2

Subject, 205 a.a., Putative inner membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 82.4 bits (202), Expect = 5e-21
 Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 8/203 (3%)

Query: 6   IFFIMNIIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIPYA-LRS 64
           +  ++ +IG+ A A+ GAL   ++ +D  G+I++   TA+GGG  RD+L+   P   ++ 
Sbjct: 2   LLHVLYLIGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGGSVRDILLGHYPLGWVKH 61

Query: 65  PNDMGVALIGVWCAIVIFKVFNEDVSNKYIIQIPDAVGLSAFTTTGAMIAYNFDVSFFGI 124
           P      +I    A++   V       + +  + DA+GL  F+  GA IA +        
Sbjct: 62  PE---YVIIVATAAVLTTIVAPVMPYLRKLFLVLDALGLVVFSIIGAQIALDMGEGPIIA 118

Query: 125 IILATLTGVGGGIISDILLQKTPSALTEDFYASCSIIGAIAFYLAILSNLSLEMSAVICS 184
           ++ A  TGV GG++ D+  ++ P    ++ YA  S   A+  Y+A L +  +    V+ S
Sbjct: 119 VVAAVTTGVFGGVLRDMFCKRIPLVFQKELYAGISFASAV-LYIA-LQHYVMNPDVVVIS 176

Query: 185 IVV--LMIRIVAILCKWSLPKFY 205
            ++     R++A+  K  LP FY
Sbjct: 177 TLLFGFTARLLALRLKLGLPVFY 199