Pairwise Alignments

Query, 209 a.a., trimeric intracellular cation channel family protein from Methanococcus maripaludis S2

Subject, 205 a.a., putative membrane protein from Alteromonas macleodii MIT1002

 Score = 96.3 bits (238), Expect = 4e-25
 Identities = 52/201 (25%), Positives = 101/201 (50%), Gaps = 2/201 (0%)

Query: 7   FFIMNIIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIPYALRSPN 66
           F  +N+ G+   A+ G L   +K +D  G++VL   TA+GGG  RD++++   + +   +
Sbjct: 5   FHWLNLAGVAVCAISGTLMAYQKRMDGFGVVVLASATAIGGGTLRDVMLDVPVFWIADTD 64

Query: 67  DMGVALIGVWCAIVIFKVFNEDVSNKYIIQIPDAVGLSAFTTTGAMIAYNFDVSFFGIII 126
            +   LI  +  I+  ++ +      Y++ I DA GL+ F   G   A   D      + 
Sbjct: 65  YLYTTLIAAFIPIIWLRI-SPRFPFHYLL-IADAFGLALFNVVGIEKALANDTGMAVAVA 122

Query: 127 LATLTGVGGGIISDILLQKTPSALTEDFYASCSIIGAIAFYLAILSNLSLEMSAVICSIV 186
           + T+TGV GG++ D++ ++ P  L  + YA   I G + + + +   L+ +   +   + 
Sbjct: 123 MGTITGVFGGLLRDVICREVPLVLNGELYAMTCIAGGVVYGIGMQMELATQWCGIAALVT 182

Query: 187 VLMIRIVAILCKWSLPKFYSE 207
            ++ R+ A+   W LP FY++
Sbjct: 183 TVLFRLGAMRWHWQLPVFYND 203