Pairwise Alignments

Query, 209 a.a., trimeric intracellular cation channel family protein from Methanococcus maripaludis S2

Subject, 214 a.a., hypothetical protein from Acinetobacter radioresistens SK82

 Score =  102 bits (254), Expect = 5e-27
 Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 4/197 (2%)

Query: 9   IMNIIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIPYA-LRSPND 67
           I+ II + A A+ GAL   ++ +D  G++++  +TALGGG  RD+L+   P   ++ P  
Sbjct: 5   IIYIIAITAEAMTGALSAGRRSMDWFGVVLIACVTALGGGSVRDVLLGHYPLTWVKHPEY 64

Query: 68  MGVALIGVWCAIVIFKVFNEDVSNKYIIQIPDAVGLSAFTTTGAMIAYNFDVSFFGIIIL 127
           + +     +  I+I K        + I  + DA+GL  FT  G  IA      F    + 
Sbjct: 65  LVLTCAAAFFTILIAKWMRH---LRNIFLVLDALGLIGFTIIGCQIALQMGHGFVVSAVA 121

Query: 128 ATLTGVGGGIISDILLQKTPSALTEDFYASCSIIGAIAFYLAILSNLSLEMSAVICSIVV 187
             LTGV GGI+ DIL    P     + YAS S +  I ++  +   LSLE++ +   +  
Sbjct: 122 GVLTGVSGGILRDILCNDVPLVFRRELYASISFVAVICYWSCLNLGLSLELTVIATLVFG 181

Query: 188 LMIRIVAILCKWSLPKF 204
             +R++AI     +PKF
Sbjct: 182 FTLRLIAIYFGLEMPKF 198



 Score = 52.8 bits (125), Expect = 5e-12
 Identities = 22/73 (30%), Positives = 40/73 (54%)

Query: 5   NIFFIMNIIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIPYALRS 64
           NIF +++ +GL+ F ++G    ++ G   +   V G++T + GGI RD+L N +P   R 
Sbjct: 87  NIFLVLDALGLIGFTIIGCQIALQMGHGFVVSAVAGVLTGVSGGILRDILCNDVPLVFRR 146

Query: 65  PNDMGVALIGVWC 77
                ++ + V C
Sbjct: 147 ELYASISFVAVIC 159