Pairwise Alignments

Query, 411 a.a., flippase from Methanococcus maripaludis S2

Subject, 415 a.a., predicted polisoprenol-linked O-antigen transporter (NCBI) from Escherichia coli BW25113

 Score = 81.6 bits (200), Expect = 4e-20
 Identities = 91/403 (22%), Positives = 178/403 (44%), Gaps = 34/403 (8%)

Query: 16  GGQFLHSIISYAIVLMIGRTFGTEGLGQYSFIIAFTAFVAYIADFGIEYYLLREIAKDNQ 75
           G  +L  ++++  ++   RT G E  G + F  A   ++    ++G      + IAK   
Sbjct: 20  GSNYLLPLLTFPYLV---RTLGPENFGIFGFCQATMLYMIMFVEYGFNLTATQSIAKAAD 76

Query: 76  NYDLISKSFGIKVFLGILCWFLIVFLTIFINKDPLV-----KLAIIIYGLASICSSIGLL 130
           + D ++  F   +F  I+   LIV   IF+    L+     K A+II+    + + +G L
Sbjct: 77  SKDKVTSIFWAVIFSKIV---LIVITLIFLTSMTLLVPEYNKHAVIIWSF--VPALVGNL 131

Query: 131 FKSI--IHANMVSKYESISILTERILTLIVGGVLLYFTKNLFLFMVVLTLDIFILNILRY 188
              I         K+ ++S +  R+  + +  + +    ++ +   + +    +  I+  
Sbjct: 132 IYPIWLFQGKEKMKWLTLSSILSRLAIIPLTFIFVNTKSDIAIAGFIQSSANLVAGIIAL 191

Query: 189 N---YASKYAKIRLKF-----NLKDGINILKKSYFFWFIYVFSFIYYNTDI-LMLGIMQS 239
               +     K+ L       +L DG ++        FI   +   Y+T I ++LG +  
Sbjct: 192 AIVVHEGWIGKVTLSLHNVRRSLADGFHV--------FISTSAISLYSTGIVIILGFISG 243

Query: 240 DSSVGIYRGGYFFIQAAMIIPVVVISTVMPSISILHTENRELLKTLFKKAFIFLSFLGIS 299
            +SVG +        A   +   +   + P IS     NR     L KK+   LS +G +
Sbjct: 244 PTSVGNFNAANTIRNALQGLLNPITQAIYPRISSTLVLNRVKGVILIKKSLTCLSLIGGA 303

Query: 300 LNLVLFIGSQSFIGLFFGNEFVESILVLQIMSFSIISIFLNSLYGSLLNATGNEKK-YAK 358
            +L+L +G+   + +  G  +  +++VL I+S     I L+++YG  +  T N KK ++K
Sbjct: 304 FSLILLLGASILVKISIGPGYDNAVIVLMIISPLPFLISLSNVYGIQVMLTHNYKKEFSK 363

Query: 359 VLGFSAILNVCLNFLLIPSMSYAGVAVSTLISNWVVT-VILMF 400
           +L  + +L++ L F L       G A++ L +  +VT ++LMF
Sbjct: 364 ILIAAGLLSLLLIFPLTTLFKEIGAAITLLATECLVTSLMLMF 406