Pairwise Alignments

Query, 234 a.a., TrmJ/YjtD family RNA methyltransferase from Methanococcus maripaludis S2

Subject, 286 a.a., tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ from Xanthobacter sp. DMC5

 Score = 82.8 bits (203), Expect = 7e-21
 Identities = 57/157 (36%), Positives = 83/157 (52%), Gaps = 11/157 (7%)

Query: 4   VVILVNPKYGGNLGAIARNMMNFDVEELRIV----GTPEILDDEAYIRAVHAKNILNNAK 59
           ++ILV P+ G N+G+ AR M NF +  LRIV    G P   +D A   A  A  IL+ A+
Sbjct: 18  LIILVEPQLGDNIGSAARAMGNFGLSRLRIVNPRQGWP---NDRARTFAAGADRILDEAQ 74

Query: 60  FYSKLEDAISDIDFTVATTGAVCGDRNVNRVPITPRELAKKHSSISG--TLGIVFGREDD 117
            +  L  A+ D+ F  ATT    G     RV       A+  S ++    + +VFGRE  
Sbjct: 75  LFPDLRAALHDVKFAFATTARERG--MAKRVVGADEATAEARSRMAAGEEVALVFGRERT 132

Query: 118 GLKNEDVELCDILVSVPTSNKYPILNLSHAVSVILYE 154
           GL  E+V LCD ++++P +  +  LNL+  V+V  YE
Sbjct: 133 GLYTEEVSLCDAILTLPVNPAFASLNLATCVAVAGYE 169