Pairwise Alignments

Query, 234 a.a., TrmJ/YjtD family RNA methyltransferase from Methanococcus maripaludis S2

Subject, 362 a.a., 'tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase (EC 2.1.1.200)' transl_table=11 from Sphingobium sp. HT1-2

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 57/155 (36%), Positives = 85/155 (54%), Gaps = 10/155 (6%)

Query: 4   VVILVNPKYGGNLGAIARNMMNFDVEELRIV----GTPEILDDEAYIRAVHAKNILNNAK 59
           V++LV P+ G N+G  AR M+NF + E+R+V    G P   + +A   A  A  IL+ A+
Sbjct: 130 VIVLVRPQLGENIGKAARAMLNFGLTEMRLVSPRDGWP---NPDAGPAAAGADFILDKAQ 186

Query: 60  FYSKLEDAISDIDFTVATTGAVCGDRNVNRVPITPRELAKKHSSISGTLGIVFGREDDGL 119
            Y  L DA++D     ATT      R V +  +TP E A++  +  G    VFG E  GL
Sbjct: 187 VYETLADAVADCAHVYATT---VRKRGVTKPVVTPEEAAQEIHAAQGRCAYVFGPERSGL 243

Query: 120 KNEDVELCDILVSVPTSNKYPILNLSHAVSVILYE 154
           + EDV L   +++VP + ++  LNL+ AV +  YE
Sbjct: 244 ETEDVALARKILTVPINPEFGSLNLAQAVILCAYE 278