Pairwise Alignments

Query, 626 a.a., ATP-dependent endonuclease from Methanococcus maripaludis S2

Subject, 667 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 53.1 bits (126), Expect = 4e-11
 Identities = 72/332 (21%), Positives = 129/332 (38%), Gaps = 55/332 (16%)

Query: 210 IPSFRDPKDQLRINNYTWFGKLLKEYTKGRNGEGIK-------------EALKNLATESN 256
           +P+ RDP D +        G+LL+      + + IK             E++K L+   +
Sbjct: 188 LPARRDPADHIAFGASALLGRLLRAVNWSDDRDSIKQLTEQITECLSENESIKTLSAGLS 247

Query: 257 QVFEELQKSVCNDNIQIAFPNTSF-------SVQYNPDPKDQDIYKSALIYVDDGFKSEL 309
             ++ L K     N  + F N+         S+ + P   + ++  + L    DG KS L
Sbjct: 248 GAWQRLHKGDFFANPSLTFANSEIEAILRHLSISFTPGHGESNVDYARL---SDGQKSML 304

Query: 310 KDK--------GSGIQSAMTIGLFNFYIKHIAHNSGSLLAIEEPELYLHPHGRRIISDRL 361
                      G  ++S          +K  A+   ++LA+EEPE  L PH    I   L
Sbjct: 305 YLSLVLTSLTIGREVRSGQNTSFDPLKLKPAAY---TILAVEEPENSLSPHYLGRIVSSL 361

Query: 362 SEFIGEDENQVILTTHSPEFICCANENINLIVVKKDKSESKAYNLQFNDIKTRQILIKKQ 421
              +G D  Q ++ T +P  +     +    +    K E+    +   D  +      ++
Sbjct: 362 KSSVGVDA-QALIATQAPSMLRRVEPDQIRYLRLNSKRETDVSTIVLPDKHSDAYKFVRE 420

Query: 422 N----SEMFFADAVLLVEG-ADKYILEEFSKEYGETKQVKSESELLGKNWLNNYNVSIIN 476
                 E++FA  V+L EG +++ +L    +  G                ++ Y V+I  
Sbjct: 421 AVQAFPELYFARLVVLGEGDSEEIVLPRILQAKGAP--------------VDEYAVAIAP 466

Query: 477 CGGKTELQKYVAVLNNLSIPNYTLADFDFFRN 508
            GG+  +  +  +LN L  P+ TL D D  R+
Sbjct: 467 LGGR-HVNHFWRLLNALGTPHMTLLDLDVGRH 497