Pairwise Alignments

Query, 663 a.a., methionine--tRNA ligase from Methanococcus maripaludis S2

Subject, 860 a.a., leucyl-tRNA synthetase from Escherichia coli BL21

 Score = 68.6 bits (166), Expect = 1e-15
 Identities = 55/233 (23%), Positives = 93/233 (39%), Gaps = 33/233 (14%)

Query: 2   RHLVTTALAYTNGPLHLGHARSTYIPADIFTRYLKLKGEEVIHVGGTDNHGVPITLTAEK 61
           ++   + L Y +G LH+GH R+ Y   D+  RY ++ G+ V+   G D  G+P    A K
Sbjct: 34  KYYCLSMLPYPSGRLHMGHVRN-YTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAVK 92

Query: 62  EGVKPIDIVDRYHNAIKADLDSLNICFDNFGR---THSDIHIETAQEFYSKLKENGYIYE 118
               P          +K  L  L   +D + R   T +  +    Q+F+++L + G +Y+
Sbjct: 93  NNTAPAPWTYDNIAYMKNQLKMLGFGYD-WSRELATCTPEYYRWEQKFFTELYKKGLVYK 151

Query: 119 KEIEQFYCEKCDMYLADRYVEGICPFCEGEARGDHCEVCGRHLEPTELVNPYCIHCNSKP 178
           K     +C      LA+  V   C                            C  C++K 
Sbjct: 152 KTSAVNWCPNDQTVLANEQVIDGC----------------------------CWRCDTKV 183

Query: 179 EIKRTTHYFFKLSAMQDSLKEYIENSPEMPEHVKNMALRWIEELHDWDVSRNI 231
           E K    +F K++A  D L   ++     P+ VK M   WI      +++ N+
Sbjct: 184 ERKEIPQWFIKITAYADELLNDLDKLDHWPDTVKTMQRNWIGRSEGVEITFNV 236



 Score = 33.9 bits (76), Expect = 3e-05
 Identities = 52/251 (20%), Positives = 95/251 (37%), Gaps = 27/251 (10%)

Query: 323 KMSTSKNWVVWVKDFVENFSSDYLRYFFMINAPLNRDTDFSWDDFQKRINTELIDIIGNF 382
           KMS SKN  +  +  VE + +D +R F M  +P   D    W +         ++    F
Sbjct: 619 KMSKSKNNGIDPQVMVERYGADTVRLFMMFASP--ADMTLEWQE-------SGVEGANRF 669

Query: 383 THRT--LVFTERKFGSTPIVDLNQLKDEDKKLISKCDDT-EKLVDSLIREYNFKDALMEI 439
             R   LV+     G    ++++ L ++ K L      T  K+ D + R   F  A+  I
Sbjct: 670 LKRVWKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAI 729

Query: 440 IHLAKEGNGYFQGMAPWAIKNEERLKEVMYTCSVVLKYIIYLLSSFMPEKTALLLEYMNE 499
           + L  +        AP   + +  L +        L  ++ +L+ F P     L + +  
Sbjct: 730 MELMNK-----LAKAPTDGEQDRALMQ------EALLAVVRMLNPFTPHICFTLWQELKG 778

Query: 500 ELDLKVRGNPLKKPKVIFTKVSDEDISRMKENLMKATKKAETKSDEKSKKVKSGEKMDII 559
           E D+     P+   K +   V D  +  ++ N  K   K     D   ++V+     + +
Sbjct: 779 EGDIDNAPWPVADEKAM---VEDSTLVVVQVN-GKVRAKITVPVDATEEQVRERAGQEHL 834

Query: 560 DIDYFGNIDLR 570
              Y   + +R
Sbjct: 835 VAKYLDGVTVR 845



 Score = 28.9 bits (63), Expect = 0.001
 Identities = 11/17 (64%), Positives = 11/17 (64%)

Query: 222 LHDWDVSRNIKWGVPIP 238
           L DW VSR   WG PIP
Sbjct: 417 LRDWGVSRQRYWGAPIP 433