Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 652 a.a., ATP-dependent zinc metalloprotease FtsH from Rhodanobacter sp000427505 FW510-R12

 Score = 49.7 bits (117), Expect = 3e-10
 Identities = 63/268 (23%), Positives = 110/268 (41%), Gaps = 46/268 (17%)

Query: 12  SLNDVAGHNKTKQALIEWIESI--------IGGQNQKPILLAGPPGSGKTTLAYAIANDY 63
           + +DVAG ++ K+ + E +E +        +GG+  + +L+ GPPG+GKT LA AIA + 
Sbjct: 159 NFSDVAGCDEAKEEVGELVEFLRDPGRFQKLGGKIPRGVLMVGPPGTGKTLLAKAIAGEA 218

Query: 64  AFDVIELNASDKRNKDVISQVVGTAAT------SKSLTGRRTLIVLDEVDGL-------- 109
                 ++ S     D +   VG  A+       ++      +I +DE+D +        
Sbjct: 219 KVPFFSISGS-----DFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGL 273

Query: 110 -SGNDDRGGVAEIIKV----LKTAENPVILTAN---DVYKPALMTLRNSVNLINVGSVHT 161
             G+D+R      + V     +  E  +++ A    DV  PAL+        + VG    
Sbjct: 274 GGGHDEREQTLNQLLVEMDGFEGTEGVIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDV 333

Query: 162 NSIPPVLRRIALKEGFEID---EKIIKMIASHSGGDLRAAINDLQSLATGGSIEIEDAKE 218
                +L+    K     D     I +     SG DL   +N+    A       E+A+E
Sbjct: 334 RGREQILKVHMRKVPIASDVDAMTIARGTPGFSGADLANLVNEAALFAAR-----ENARE 388

Query: 219 LPDRDSEKSIFDAMRIIMKTTHYDIATS 246
           +     +K+     +I+M T    +A S
Sbjct: 389 VRMSHLDKA---RDKILMGTERRSMAMS 413