Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 445 a.a., replication-associated recombination protein A from Rhodanobacter sp000427505 FW510-R12

 Score = 47.0 bits (110), Expect = 1e-09
 Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 29/216 (13%)

Query: 6   EKYRPKSLNDVAGHNKTKQALIEWIESIIGGQNQKPILLAGPPGSGKTTLAYAIANDYAF 65
           E+ RP+SL+++ G  +          ++  G+    +L  GPPG GKTTLA  +A     
Sbjct: 24  ERMRPRSLDEIVGQQRLVGPDKALRRALEAGKIHSMVLW-GPPGCGKTTLALLVARYADA 82

Query: 66  DVIELNASDKRNKDVISQVVGTAATSKSLTGRRTLIVLDEV--------DGLSGNDDRGG 117
           D   ++A      DV   +    A      GRRT++ +DEV        D    + +RG 
Sbjct: 83  DFRAISAVLSGLPDVRKAL--AEAELNFTQGRRTVLFVDEVHRFNKTQQDAFLPHIERG- 139

Query: 118 VAEIIKVLKTAENPVILTANDVYKPALMTLRNSVNLINVGSVHTNSIPPVLRRIALKE-- 175
              II +  T ENP     +     AL++ R  V+++    V T  I   L+R  + +  
Sbjct: 140 --VIIFIGATTENP-----SFELNSALLS-RCRVHVLE--PVSTGDIIAALKRALVDDER 189

Query: 176 -----GFEIDEKIIKMIASHSGGDLRAAINDLQSLA 206
                  ++ E+ +  IA  + GD+R A+  L+  A
Sbjct: 190 GLGALQLQVSEEALDSIAQAADGDVRRALTLLEIAA 225