Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 638 a.a., Cell division-associated, ATP-dependent zinc metalloprotease FtsH from Variovorax sp. SCN45

 Score = 45.8 bits (107), Expect = 4e-09
 Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 28/124 (22%)

Query: 15  DVAGHNKTKQALIEWIESI--------IGGQNQKPILLAGPPGSGKTTLAYAIANDYAFD 66
           DVAG ++ K+ + E ++ +        +GG+  + +LL GPPG+GKT LA +IA +    
Sbjct: 162 DVAGCDEAKEEVREVVDFLKDPQRFQKLGGRIPRGLLLVGPPGTGKTLLAKSIAGEAKVP 221

Query: 67  VIELNASDKRNKDVISQVVGTAAT------SKSLTGRRTLIVLDEVDGL---------SG 111
              ++ S     D +   VG  A         +      +I +DE+D +          G
Sbjct: 222 FFSISGS-----DFVEMFVGVGAARVRDMFENAKKNAPCIIFIDEIDAVGRQRGAGLGGG 276

Query: 112 NDDR 115
           ND+R
Sbjct: 277 NDER 280