Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 648 a.a., Cell division-associated, ATP-dependent zinc metalloprotease FtsH from Sphingobium sp. HT1-2

 Score = 51.2 bits (121), Expect = 1e-10
 Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 35/170 (20%)

Query: 6   EKYRPKSLNDVAGHNKTKQALIEWIESI--------IGGQNQKPILLAGPPGSGKTTLAY 57
           EK+   + +DVAG ++ ++ L E +E +        +GG+  K  LL G PG+GKT LA 
Sbjct: 156 EKHGKVTFDDVAGIDEAREELQEIVEFLKDPSKFARLGGKIPKGALLVGSPGTGKTLLAR 215

Query: 58  AIANDYAFDVIELNASDKRNKDVISQVVGTAAT------SKSLTGRRTLIVLDEVDGL-- 109
           AIA +       ++ S     D +   VG  A+       ++      ++ +DE+D +  
Sbjct: 216 AIAGEAGVPFFTISGS-----DFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGR 270

Query: 110 -------SGNDDRGGVAEIIKV----LKTAENPVILTAN---DVYKPALM 145
                  +GND+R      + V     +  E  +I+ A    DV  PAL+
Sbjct: 271 HRGAGLGNGNDEREQTLNQLLVEMDGFEANEGIIIVAATNRPDVLDPALL 320