Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 637 a.a., integral membrane ATP-dependent zinc metallopeptidase from Pseudomonas putida KT2440

 Score = 50.4 bits (119), Expect = 2e-10
 Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 40/241 (16%)

Query: 12  SLNDVAGHNKTKQALIEWIESI--------IGGQNQKPILLAGPPGSGKTTLAYAIANDY 63
           +L DVAG ++ K+ + E +E +        +GG+  + +L+ GPPG+GKT LA AIA + 
Sbjct: 155 TLADVAGCDEAKEEVGELVEFLRDPGKFQRLGGRIPRGVLMVGPPGTGKTLLAKAIAGEA 214

Query: 64  AFDVIELNASDKRNKDVISQVVGTAAT------SKSLTGRRTLIVLDEVDGL-------- 109
                 ++ S     D +   VG  A+       ++      +I +DE+D +        
Sbjct: 215 KVPFFTISGS-----DFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGM 269

Query: 110 -SGNDDRGGVAEIIKV----LKTAENPVILTAN---DVYKPALMTLRNSVNLINVGSVHT 161
             G+D+R      + V     +  +  +++ A    DV  PAL+        + VG    
Sbjct: 270 GGGHDEREQTLNQLLVEMDGFEMNDGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDI 329

Query: 162 NSIPPVL----RRIALKEGFEIDEKIIKMIASHSGGDLRAAINDLQSLATGGSIEIEDAK 217
                +L    R++ + E       I +     SG DL   +N+    A   +  + + K
Sbjct: 330 RGREQILKVHMRKVPIGENVN-PAVIARGTPGFSGADLANLVNEASLFAARSNKRLVEMK 388

Query: 218 E 218
           E
Sbjct: 389 E 389