Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 441 a.a., DNA-dependent ATPase required for recombination from Pseudomonas putida KT2440

 Score = 45.1 bits (105), Expect = 5e-09
 Identities = 52/224 (23%), Positives = 92/224 (41%), Gaps = 17/224 (7%)

Query: 7   KYRPKSLNDVAGHNKTKQALIEWIESIIGGQNQKPILLAGPPGSGKTTLAYAIAN--DYA 64
           + RP SL++  G            E++  G     I   GPPG GKTTLA  +A   D  
Sbjct: 16  RLRPSSLDEYVGQEHLLARGKPLREALEQGALHSMIFW-GPPGVGKTTLARLLAQFCDAH 74

Query: 65  FDVIELNASDKRNKDVISQVVGTAATSKSLTGRRTLIVLDEVDGLSGNDDRGGV-----A 119
           F+ +    +  +    I Q V  A       GRRT++ +DEV   + +     +      
Sbjct: 75  FETVSAVLAGVKE---IRQAVEVAKQQAGQYGRRTILFVDEVHRFNKSQQDAFLPYVEDG 131

Query: 120 EIIKVLKTAENPVILTANDVYKPALMTLRNSVNLINVGSVHTNSIPPVLRRIALKEGFEI 179
            ++ +  T ENP     N +   A + +  S++   +  +   ++     R   K    +
Sbjct: 132 TLLFIGATTENPSFELNNALLSRARVYVLKSLDEAALRKLVNRALTE--ERGLGKRNLRV 189

Query: 180 DEKIIKMIASHSGGDLRAAINDLQSLA----TGGSIEIEDAKEL 219
            +   KM+ + + GD R  +N L++ +     G  I++E  + L
Sbjct: 190 GDDAFKMLMAAADGDGRRMLNFLENASDLAEDGSEIDVEMLQSL 233