Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 640 a.a., DNA polymerase III, subunit gamma and tau from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 46.6 bits (109), Expect = 3e-09
 Identities = 54/239 (22%), Positives = 92/239 (38%), Gaps = 43/239 (17%)

Query: 1   MEEWV---EKYRPKSLNDVAGHNKTKQALIEWIESIIGGQNQKPILLAGPPGSGKTTLAY 57
           ME +V    KYRP + + V G +     L   I S    Q     L  GP G GKTT A 
Sbjct: 1   MENFVVSARKYRPTTFDSVVGQHHITNTLKNAISSHHLAQ---AFLFCGPRGVGKTTCAR 57

Query: 58  AIA-------------------------NDYAFDVIELNASDKRNKDVISQVVGTAATSK 92
            +A                         ++ +F++ EL+A+   + + I  +V     + 
Sbjct: 58  ILAKTINCQNITPEIEACNECESCRSFNSNSSFNIHELDAASNNSVEDIRNLVEQVRYAP 117

Query: 93  SLTGRRTLIVLDEVDGLSGNDDRGGVAEIIKVLKTAENP----VILTANDVYKPALMTLR 148
             TG+  + ++DEV  LS              LKT E P    + + A       + T+ 
Sbjct: 118 Q-TGKYKIYIIDEVHMLSNQ-------AFNAFLKTLEEPPSYAIFILATTERHKIIPTIL 169

Query: 149 NSVNLINVGSVHTNSIPPVLRRIALKEGFEIDEKIIKMIASHSGGDLRAAINDLQSLAT 207
           +   + +   +    +   L  IA KE  + +   + +I+  + G LR A++    + T
Sbjct: 170 SRCQIFDFNRIRIEDMVRHLGSIAQKESIQAEPDALHLISQKADGALRDALSIFDQMVT 228