Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 596 a.a., DNA polymerase III subunit gamma/tau from Magnetospirillum magneticum AMB-1

 Score = 48.5 bits (114), Expect = 6e-10
 Identities = 61/269 (22%), Positives = 104/269 (38%), Gaps = 52/269 (19%)

Query: 7   KYRPKSLNDVAGHNKTKQALIEWIESIIGGQNQKPILLAGPPGSGKTTLAY--------- 57
           KYRP     + G     + L   I++   G+     +L G  G GKTT A          
Sbjct: 16  KYRPTDFAGLIGQEAMVRTLSNAIKT---GRLAHAFVLTGVRGVGKTTTARIIARALNCV 72

Query: 58  --------------------AIANDYAFDVIELNASDKRNKDVISQVVGTAATSKSLTGR 97
                               AIA D   D++E++A+ +   + I +++      +  + R
Sbjct: 73  GLDGKGGPTIDPCGQCEHCRAIAEDRHVDILEMDAASRTGVNDIREII-EGVRYRPTSAR 131

Query: 98  RTLIVLDEVDGLSGNDDRGGVAEIIKVLKTAENPV----ILTANDVYKPALMTLRNSVNL 153
             + ++DEV  LS        A    +LKT E P      + A    +   +T+ +    
Sbjct: 132 FKIYIIDEVHMLS-------TAAFNALLKTLEEPPEHVKFVFATTEIRKIPVTVLSRCQR 184

Query: 154 INVGSVHTNSIPPVLRRIALKEGFEIDEKIIKMIASHSGGDLRAAINDLQSLATGGS--- 210
            ++  V    +      IA KE  EI+   +K+IA  + G +R  ++ L    + G+   
Sbjct: 185 FDLRRVEMEVLAKHFESIAAKEQAEIEPAALKLIARAADGSVRDGLSLLDQAISHGAGAV 244

Query: 211 --IEIEDAKELPDRDSEKSIFDAMRIIMK 237
              ++ D   L DR     +FD +  IMK
Sbjct: 245 TEAQVRDMLGLADR---ARVFDLLDAIMK 270