Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 641 a.a., ATP-dependent metalloprotease FtsH from Kangiella aquimarina DSM 16071

 Score = 46.6 bits (109), Expect = 3e-09
 Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 40/221 (18%)

Query: 15  DVAGHNKTKQALIEWIESI--------IGGQNQKPILLAGPPGSGKTTLAYAIANDYAFD 66
           DVAG  + K+ + E ++ +        +GG+  + +L+ GPPG+GKT LA AIA +    
Sbjct: 160 DVAGVEEAKEEVGELVDFLRDPRKFQRLGGKIPRGVLMVGPPGTGKTLLARAIAGEAKVP 219

Query: 67  VIELNASDKRNKDVISQVVGTAAT------SKSLTGRRTLIVLDEVDGL---------SG 111
              ++ S     D +   VG  A+       ++      +I +DE+D +          G
Sbjct: 220 FFTISGS-----DFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGG 274

Query: 112 NDDRGGVAEIIKV----LKTAENPVILTAN---DVYKPALMTLRNSVNLINVGSVHTNSI 164
           +D+R      + V     +  E  +++ A    DV  PAL+        + VG       
Sbjct: 275 HDEREQTLNQLLVEMDGFEGGEGVIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDIKGR 334

Query: 165 PPVL----RRIALKEGFEIDEKIIKMIASHSGGDLRAAIND 201
             +L    R++ + +  E    I +     SG DL   +N+
Sbjct: 335 EQILKVHMRKVPIGDDVE-PGVIARGTPGFSGADLANLVNE 374