Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 647 a.a., ATP-dependent zinc metalloprotease FtsH from Escherichia coli ECRC100

 Score = 57.0 bits (136), Expect = 2e-12
 Identities = 64/245 (26%), Positives = 104/245 (42%), Gaps = 48/245 (19%)

Query: 15  DVAGHNKTKQALIEWIESI--------IGGQNQKPILLAGPPGSGKTTLAYAIANDYAFD 66
           DVAG ++ K+ + E +E +        +GG+  K +L+ GPPG+GKT LA AIA +    
Sbjct: 156 DVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVP 215

Query: 67  VIELNASDKRNKDVISQVVGTAAT------SKSLTGRRTLIVLDEVDGL---------SG 111
              ++ S     D +   VG  A+       ++      +I +DE+D +          G
Sbjct: 216 FFTISGS-----DFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGG 270

Query: 112 NDDRGGVAEIIKV----LKTAENPVILTAN---DVYKPALMTLRNSVNLINVGSVHTNSI 164
           +D+R      + V     +  E  +++ A    DV  PAL+        + VG       
Sbjct: 271 HDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGR 330

Query: 165 PPVL----RRIALKEGFEIDEKII-KMIASHSGGDLRAAINDLQSLATGGS------IEI 213
             +L    RR+ L    +ID  II +     SG DL   +N+    A  G+      +E 
Sbjct: 331 EQILKVHMRRVPLAP--DIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEF 388

Query: 214 EDAKE 218
           E AK+
Sbjct: 389 EKAKD 393