Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 675 a.a., ATP-dependent zinc metalloprotease FtsH from Bacteroides stercoris CC31F

 Score = 48.1 bits (113), Expect = 9e-10
 Identities = 62/249 (24%), Positives = 97/249 (38%), Gaps = 44/249 (17%)

Query: 12  SLNDVAGHNKTKQALIEWIESI--------IGGQNQKPILLAGPPGSGKTTLAYAIANDY 63
           +  DVAG  + KQ + E +E +        +GG+  K  LL GPPG+GKT LA A+A + 
Sbjct: 189 TFKDVAGLAEAKQEVEEIVEFLKQPQKYTDLGGKIPKGALLVGPPGTGKTLLAKAVAGEA 248

Query: 64  AFDVIELNASDKRNKDVISQVVGTAATSKSLTGRRT------LIVLDEVD---------- 107
                 L  S     D +   VG  A+      R+       ++ +DE+D          
Sbjct: 249 NVPFFSLAGS-----DFVEMFVGVGASRVRDLFRQAKEKAPCIVFIDEIDAVGRARGKAA 303

Query: 108 GLSGNDDRGGVAEIIKV----LKTAENPVILTAN---DVYKPALMTLRNSVNLINVGSVH 160
            + GND+R      +        +    +IL A    DV   AL+        I+V    
Sbjct: 304 AMGGNDERENTLNQLLTEMDGFGSNSGVIILAATNRVDVLDKALLRAGRFDRQIHVDLPD 363

Query: 161 TNSIPPV----LRRIALKEGFEIDEKIIKMIASHSGGDLRAAINDLQSLATGGS---IEI 213
            N    V    LR I +    ++ E + +     SG D+    N+   +A       +E 
Sbjct: 364 LNERKEVFGVHLRPIKIDNTVDV-ELLARQTPGFSGADIANVCNEAALIAARHGKKFVEK 422

Query: 214 EDAKELPDR 222
           +D  +  DR
Sbjct: 423 QDFLDAVDR 431