Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 648 a.a., ATP-dependent zinc metalloprotease FtsH from Alteromonas macleodii MIT1002

 Score = 52.0 bits (123), Expect = 6e-11
 Identities = 57/245 (23%), Positives = 104/245 (42%), Gaps = 43/245 (17%)

Query: 15  DVAGHNKTKQALIEWIESI--------IGGQNQKPILLAGPPGSGKTTLAYAIANDYAFD 66
           DVAG ++ K+ + E ++ +        +GG+  K +L+ GPPG+GKT LA AIA +    
Sbjct: 157 DVAGCDEAKEDVSELVDFLRDPSKFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVP 216

Query: 67  VIELNASDKRNKDVISQVVGTAAT------SKSLTGRRTLIVLDEVDGL---------SG 111
              ++ S     D +   VG  A+       ++      +I +DE+D +          G
Sbjct: 217 FFTISGS-----DFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGG 271

Query: 112 NDDRGGVAEIIKV----LKTAENPVILTAN---DVYKPALMTLRNSVNLINVGSVHTNSI 164
           +D+R      + V     +  E  +++ A    DV  PAL+        + VG       
Sbjct: 272 HDEREQTLNQMLVEMDGFEGHEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDIRGR 331

Query: 165 PPVL----RRIALKEGFEIDEKIIKMIASHSGGDLRAAINDLQSLATGGS---IEIEDAK 217
             +L    R++ + +  E    I +     SG DL   +N+    A  G+   + +E+ +
Sbjct: 332 EQILKVHIRKVPVADNVE-PSVIARGTPGFSGADLANLVNEAALFAARGNKRLVSMEEFE 390

Query: 218 ELPDR 222
           +  D+
Sbjct: 391 KAKDK 395