Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 624 a.a., DNA polymerase III, tau subunit from Agrobacterium fabrum C58

 Score = 51.6 bits (122), Expect = 8e-11
 Identities = 62/266 (23%), Positives = 108/266 (40%), Gaps = 46/266 (17%)

Query: 7   KYRPKSLNDV-AGHNKTKQALIEWIESIIGGQNQKPILLAGPPGSGKTTLAYAIANDYAF 65
           KYRPK  +D+  G     + L    E+   G+  +  +L G  G GKTT A  +A    +
Sbjct: 24  KYRPKDFSDLMVGQEPMVRTLTNAFET---GRIAQAYMLTGVRGVGKTTTARILARALNY 80

Query: 66  ----------------------------DVIELNASDKRNKDVISQVVGTAATSKSLTGR 97
                                       DVIE++A+     D I +++      + ++ R
Sbjct: 81  KTDTIDKPTIDLRIPGEHCQAIMEGRHVDVIEMDAASHTGIDDIREII-EQVRYRPVSAR 139

Query: 98  RTLIVLDEVDGLSGNDDRGGVAEIIKVLKTAENPV----ILTANDVYKPALMTLRNSVNL 153
             + ++DEV  LS     G       +LKT E P      + A    +   +T+ +    
Sbjct: 140 YKVYIIDEVHMLSTQAFNG-------LLKTLEEPPEHVKFIFATTEIRKVPITVLSRCQR 192

Query: 154 INVGSVHTNSIPPVLRRIALKEGFEIDEKIIKMIASHSGGDLRAAINDL-QSLATGGS-I 211
            ++  +    +  +   IA KEGFE + + + MIA  + G  R  ++ L Q++A GG  +
Sbjct: 193 FDLRRISAADLVGLFTAIAGKEGFEAEPQALSMIARAAEGSARDGLSLLDQAIAHGGGRV 252

Query: 212 EIEDAKELPDRDSEKSIFDAMRIIMK 237
           E E  + +        I D  + ++K
Sbjct: 253 EAEAVRGMLGLADRARIVDLFQHVVK 278