Pairwise Alignments

Query, 612 a.a., indolepyruvate ferredoxin oxidoreductase subunit alpha from Methanococcus maripaludis S2

Subject, 1178 a.a., Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 92.8 bits (229), Expect = 7e-23
 Identities = 126/542 (23%), Positives = 225/542 (41%), Gaps = 86/542 (15%)

Query: 24  FGAGYPGTPSTEVMETLIKNAKKYN-YYVEWST--NEKVALETAIG---------ASFSG 71
           F  GYPG+P   V   + +N K  + +++   T  NE++A   A G         A + G
Sbjct: 53  FVCGYPGSPVGGVDGEMQRNQKLLDTHHIVHRTGLNEELAATAAFGTQALHETPGARYDG 112

Query: 72  ASSIVTMKQVGLNVASDPLMSLTYLGI--KGPLVLLVTDDPGPHSSQTEQDTRSFGLFSN 129
             ++   K  G++ A D      + G+   G ++++  DDP   S+    D+ +      
Sbjct: 113 VFAMWFGKAPGVDRAGDAFHHHNFRGVGRNGGVLVVAGDDPHARSTIFPSDSNAAFYKFF 172

Query: 130 IPVLDPSNSQEAYEMTKYAFKISKEYETPVILRTTTRVS---------HRCDDVVLEELK 180
           +P+L P N QE  +   + + +S+        +  T V+         H     VL E+ 
Sbjct: 173 MPILAPGNVQEVIDFGLHGYALSRASGLWTGFKFVTDVADSAGVAWVGHDRVQPVLPEVL 232

Query: 181 PSDENIEEFSKSSRWAIFPKLTAERHPILEKLQKTLSNKFSD----SKFNFKTGTGKIGI 236
              + ++   + +  A  P + AER   +   Q  ++ +++     ++   +    +IGI
Sbjct: 233 YDGQPLKPVFRPNE-AGPPLIEAERR--IANGQLEIARRYAALNGLNRIVVQPKAPRIGI 289

Query: 237 ITSGASYHYVNEAISN----NKELFS-----VLKIGTPHPFPENKVIEFTNEVDSIIVVE 287
           +T G +Y+ V +A+S+    + E  +     +LK+G  +P   + V EF   +  ++VVE
Sbjct: 290 VTWGKTYYDVRQALSDLGLHSDEALAEAGVGILKMGLIYPVEPDIVREFARGMPELLVVE 349

Query: 288 ELDSYLEDQLLQLLGKQGILKPIYGKKNN----IFPCCGEYSVDIVKIGINKVLDSL--- 340
           +   ++E  L ++L        I GK +     + P  GE S D +   + K L  L   
Sbjct: 350 DKRPFVELFLKEILYGTPDQPRIVGKADEHGAPLLPLQGEQSADTIARALLKRLGPLVQT 409

Query: 341 ---KLQKLEISEKLIDKNDIIPLPVRPPNLCAGCMHRTVFYAFKEVSKELKKHNIQTIFS 397
              + + L ++   + +  I+    R P  C+GC H T           LK  +   + +
Sbjct: 410 PVAQSRALLLNPPALKRAPIMLSTARTPYFCSGCPHNT----------SLKAPDGAIVGA 459

Query: 398 GDIGCYTLGNAPPLELIDTCLCMGAGISIAGGISRT-------------TKNSKNVAFIG 444
           G IGC+ +            L MG G  +  G ++              T  +     +G
Sbjct: 460 G-IGCHIMD-----------LWMGEGFGVVKGYTQMGGEGAQWVGLAPFTDTAHFFQNLG 507

Query: 445 DSTFFHSGIPAVINAVYNNADVTIAVLDNRTTAMTGHQPHPGTGKTALGKPTKLIDIEGI 504
           D TF HSG  A+  AV     VT  +L N T AMTG Q     G   +    K+++ EG+
Sbjct: 508 DGTFAHSGSLAIRFAVAAKTHVTYKLLYNSTVAMTGGQDI--LGGMTVPDMVKMLEAEGV 565

Query: 505 LK 506
            +
Sbjct: 566 AR 567