Pairwise Alignments

Query, 612 a.a., indolepyruvate ferredoxin oxidoreductase subunit alpha from Methanococcus maripaludis S2

Subject, 618 a.a., 4Fe-4S dicluster domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  348 bits (894), Expect = e-100
 Identities = 237/628 (37%), Positives = 332/628 (52%), Gaps = 60/628 (9%)

Query: 7   LMGNEAIAYGAIAAGLQFGAGYPGTPSTEVMETLIKNAKKYNYYVEWSTNEKVALETAIG 66
           L GN+AIA G   AG +  A YPGTPSTE++E+L   +   + Y EWS NEKVA+E AIG
Sbjct: 15  LSGNDAIARGVWEAGAKVAAAYPGTPSTEILESL---SLYPDLYAEWSVNEKVAMEVAIG 71

Query: 67  ASFSGASSIVTMKQVGLNVASDPLMSLTYLGIKGPLVLLVTDDPGPHSSQTEQDTRSFGL 126
            S SGA S   MK VGLNVASD  M++T  G+ G LV+ V DD G  SSQ EQD+R +G 
Sbjct: 72  GSMSGARSFCAMKHVGLNVASDAFMTVTVAGVIGGLVIAVADDVGMSSSQNEQDSRFWGR 131

Query: 127 FSNIPVLDPSNSQEAYEMTKYAFKISKEYETPVILRTTTRVSHRCDDVVLEELKPSDENI 186
           F+++PVL+P++SQEAYEM KYAF++S+ Y TPVILR TTRV H    V + E    D  I
Sbjct: 132 FAHVPVLEPADSQEAYEMAKYAFELSEAYNTPVILRLTTRVCHVKAVVQVGEKVAHD--I 189

Query: 187 EEF-SKSSRWAIFPKLTAERHPILEKLQKTLSNKFSDSKFNF-KTGTGK-IGIITSGASY 243
             F S + RW + P       P     +  L      S  NF   G  K +G +TSG +Y
Sbjct: 190 GGFKSDARRWVMTPANAKGLLPAQIAREGKLQALAEASPMNFLDDGPDKRVGFVTSGPAY 249

Query: 244 HYVNEAISNNKELFSVLKIGTPHPFPENKVIEFTNEVDSIIVVEELDSYLEDQLLQLLGK 303
            +V E+  +      VLK+G  +P P   V +   +V+ ++VVEE +  +E +L     K
Sbjct: 250 MHVRESFPD----APVLKLGFTYPVPVALVEKLAAQVEHLVVVEETEPLMEQEL-----K 300

Query: 304 QGILKPIYGKKNNIFPCCGEYSVDIVKIGINKVLDSLKLQKLEISEKLIDKNDIIPLPVR 363
              L+ I+GK  ++ P  GE +        N ++ ++K    E            P P R
Sbjct: 301 AAGLQAIHGK--DLLPRLGELTP-------NVLIPAIKTFLGEPLPPTTTYPKFDPFP-R 350

Query: 364 PPNLCAGCMHRTVFYAFKEVSKELKKHNIQTIFSGDIGCYTLGNAPPLELIDTCLCMGAG 423
           PP +CA C H  V+Y+   + K     N+Q   SGDIGCYTLG   P   +D+ + MGA 
Sbjct: 351 PPTMCAACPHMGVYYSLARMRK-----NVQ--ISGDIGCYTLGAGHPWNALDSTISMGAS 403

Query: 424 ISIAGGISRT----TKNSKNVAFIGDSTFFHSGIPAVINAVYNNADVTIAVLDNRTTAMT 479
           + IA G+ +     TK+   VA IGDSTF H G+  +++ VYN  +VT+ +LDNRTT MT
Sbjct: 404 MGIALGMDKARTEETKDKAVVAVIGDSTFLHMGMQGLLDIVYNRGNVTVLILDNRTTGMT 463

Query: 480 GHQPHPGTGKTALGKPTKLIDIEGILKSCGVEFVKTVSADDF--SACKEISKEVIEYNGP 537
           G Q H GTGK   G  T  +D   ++++ GV+  +    D +      +  K+       
Sbjct: 464 GGQNHAGTGKGLKGDDTPRVDFAKLVEALGVKPERISKIDPYVLPVVFKTIKQETAIPEV 523

Query: 538 SAVVFRGNCV---SLVKSDKKYVIDKNKCINCKICVERLGCPAITMNDEIPEIMDN---- 590
           S ++    CV      K +   VID++ C  C  C+  +GCPAIT+     ++  +    
Sbjct: 524 SVIITDRPCVLSEFYTKIEPYKVIDED-CTGCGNCI-NVGCPAITVKRSESKVRPDGKVN 581

Query: 591 -----------CTGCGLCKAVCPANAVI 607
                      CTGC +C   C   A++
Sbjct: 582 ELKFTTIDTAMCTGCHMCVESCGPKAIV 609