Pairwise Alignments

Query, 360 a.a., hydrogenase formation protein HypD from Methanococcus maripaludis S2

Subject, 373 a.a., protein required for maturation of hydrogenases (NCBI) from Escherichia coli BW25113

 Score =  254 bits (648), Expect = 3e-72
 Identities = 134/333 (40%), Positives = 192/333 (57%), Gaps = 8/333 (2%)

Query: 31  VKIMHVCGSHEHTICKYGIRDVLPDNITVVPGPGCPVCVTTQKEIDKAMYLAEQGYTI-A 89
           ++IM VCG H H I K+G+  +LP+N+  + GPGCPVCV     ID  + +A     I  
Sbjct: 35  LRIMEVCGGHTHAIFKFGLDQLLPENVEFIHGPGCPVCVLPMGRIDTCVEIASHPEVIFC 94

Query: 90  TLGDMYRVPGSKKSLMQLQSEGADVKIVYGIGDAVKLAKKQD-EKVVFVAIGFETTAPTT 148
           T GD  RVPG + SL+Q ++ GADV+IVY   DA+KLA++    KVVF  +GFETT PTT
Sbjct: 95  TFGDAMRVPGKQGSLLQAKARGADVRIVYSPMDALKLAQENPTRKVVFFGLGFETTMPTT 154

Query: 149 AAELLNKP----ENFYILNSHRQTPPVMGFLLGGGTSLNLDGFICPGHVSTITGLKPYYD 204
           A  L        +NFY    H    P +  LL    +  +D F+ PGHVS + G   Y  
Sbjct: 155 AITLQQAKARDVQNFYFFCQHITLIPTLRSLLEQPDN-GIDAFLAPGHVSMVIGTDAYNF 213

Query: 205 PCKTYHAPMVVAGFEPIDVMASIVMILKQLVNGEAKVENEYTRGVREEGNVIAQKIMNKV 264
               +H P+VVAGFEP+D++  +VM+++Q +   +KVEN+Y R V + GN++AQ+ +  V
Sbjct: 214 IASDFHRPLVVAGFEPLDLLQGVVMLVQQKIAAHSKVENQYRRVVPDAGNLLAQQAIADV 273

Query: 265 F-EPADVAWRGFPVIKDGGMKLREEFKKYDVHENIDVPDIKETINKACICSEILRGEKLP 323
           F    D  WRG  VI+  G+ L  +++++D   +      +   +    C E+L G+  P
Sbjct: 274 FCVNGDSEWRGLGVIESSGVHLTPDYQRFDAEAHFRPAPQQVCDDPRARCGEVLTGKCKP 333

Query: 324 HDCKLFGKTCDPMNPVGSCMVSDEGTCRIFYKY 356
           H C LFG TC+P    G+ MVS EG C  +Y+Y
Sbjct: 334 HQCPLFGNTCNPQTAFGALMVSSEGACAAWYQY 366