Pairwise Alignments

Query, 360 a.a., hydrogenase formation protein HypD from Methanococcus maripaludis S2

Subject, 371 a.a., hydrogenase formation protein HypD from Dickeya dianthicola ME23

 Score =  264 bits (674), Expect = 3e-75
 Identities = 145/359 (40%), Positives = 200/359 (55%), Gaps = 13/359 (3%)

Query: 12  ELIKKSIQTIQKLSEKLDEVK-----IMHVCGSHEHTICKYGIRDVLPDNITVVPGPGCP 66
           EL K  +Q IQ L + + ++K     +M VCG H H I K+GI  +LP  I  V GPGCP
Sbjct: 11  ELAKSLLQRIQALVDDMPQLKARPLQLMEVCGGHTHAIFKFGIDRLLPPEIEFVHGPGCP 70

Query: 67  VCVTTQKEIDKAMYLAEQGYTI-ATLGDMYRVPGSKKSLMQLQSEGADVKIVYGIGDAVK 125
           VCV     ID  + +A +   I  T GD  RVPG   SL   +  GADV++VY   DA+ 
Sbjct: 71  VCVLPMGRIDACLEIAARPEVIFCTFGDAMRVPGRNGSLQDARRHGADVRVVYSPLDALA 130

Query: 126 LAKK-QDEKVVFVAIGFETTAPTTAAELLNKPE----NFYILNSHRQTPPVMGFLLGGGT 180
           LA++  D +VVF  +GFETT P+TA  L         NF +   H    P +  LL    
Sbjct: 131 LAEQFPDRQVVFFGLGFETTMPSTALTLQQAKRRGIGNFSLFCQHITIIPTLKSLLEQ-P 189

Query: 181 SLNLDGFICPGHVSTITGLKPYYDPCKTYHAPMVVAGFEPIDVMASIVMILKQLVNGEAK 240
            L +DGF+ PGHVS + G  PY   C+ +H P VV GFEP+D++ +++M+++QL +   +
Sbjct: 190 DLRIDGFLAPGHVSMVIGAYPYQPLCEQFHKPFVVTGFEPLDILQALLMLVQQLHDARCE 249

Query: 241 VENEYTRGVREEGNVIAQKIMNKVFE-PADVAWRGFPVIKDGGMKLREEFKKYDVHENID 299
           VEN+Y R V + GN +AQ+ M +VFE  A   WRG   I D GM+LR E+ ++D      
Sbjct: 250 VENQYRRIVPDSGNTLAQQAMAEVFETKASSEWRGLGEIADSGMQLRAEYAEFDAERRFK 309

Query: 300 VPDIKETINKACICSEILRGEKLPHDCKLFGKTCDPMNPVGSCMVSDEGTCRIFYKYSK 358
               +        C E+L G   P DC LFG+ C P N +G+ MVS EG C  +Y+Y +
Sbjct: 310 PQQQRVADEPLSRCGEVLTGRCKPGDCPLFGQRCTPQNAIGALMVSSEGACAAYYQYRR 368