Pairwise Alignments

Query, 601 a.a., translation initiation factor IF-2 from Methanococcus maripaludis S2

Subject, 841 a.a., translation initiation factor IF-2 from Pseudomonas simiae WCS417

 Score =  162 bits (410), Expect = 5e-44
 Identities = 163/563 (28%), Positives = 250/563 (44%), Gaps = 117/563 (20%)

Query: 7   RCPIVSVLGHVDHGKTSLLDKIRRTRVTQREAGGITQHIGASEIPINTIKKVSKDLLGLF 66
           R P+V+V+GHVDHGKTSLLD IRR +V   EAGGITQHIGA  +  +          G+ 
Sbjct: 342 RAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETDR---------GM- 391

Query: 67  KADLSIPGILVIDTPGHEAFTSLRKRGGALADIAILVVDINEGFKPQTIEAINILKQCKT 126
                   +  +DTPGH AFT++R RG    DI ILVV  ++G  PQTIEA+   K    
Sbjct: 392 --------VTFLDTPGHAAFTAMRARGAKATDIVILVVAADDGVMPQTIEAVQHAKAAGV 443

Query: 127 PFVVAANKVDRIPGWNSSEGPFILNFNEKNQHPNAMTEFEIRLYENVIKHLNELGFDADL 186
           P VVA NK+D+ PG +                            + +   L+  G  ++ 
Sbjct: 444 PLVVAVNKIDK-PGAD---------------------------LDRIRSELSVHGVTSEE 475

Query: 187 FSRVKDTTKTINVVPVSAMTGEGVPDLLVIISGLAQRFLEQKLALNVEGYAKGTVLELKE 246
           +    DT      VPVSA  G GV +LL  +  L    LE     +  G  +G V+E + 
Sbjct: 476 WG--GDTP----FVPVSAKMGTGVDELLEAVL-LQAEVLELTATPSAPG--RGVVVESRL 526

Query: 247 EKGLGKTIDAIIYDGIAKTGDFLVVGNPDGVLVSKIKALLKPKELDEMRDPKDKFKPSKQ 306
           +KG G     ++ DG  + GD ++VG+  G    +++A+L            +  KP K+
Sbjct: 527 DKGRGPVATVLVQDGTLRQGDMVLVGSNYG----RVRAML-----------DENGKPIKE 571

Query: 307 ISAATGVKI-------SAPDLDSVIAG------------SPLRIVPKNQVEAAK-EEVLE 346
              A  V+I        A D  SV+A                R V   +  A K E + E
Sbjct: 572 AGPAIPVEILGLDGTPDAGDEMSVVADEKKAREVALFRQGKFREVKLARAHAGKLENIFE 631

Query: 347 EV--EEFTILTDDEGIIIKADTMGSLEALANELR-----KVNAKIKKAEVGDISKKDVIE 399
            +  EE   L     I++K+D  GSLEAL   L      +V  ++    VG I++ D   
Sbjct: 632 NMGQEEKKTL----NIVLKSDVRGSLEALNGALNGLGNDEVQVRVVGGGVGGITESDANL 687

Query: 400 ASSYASTNPLNGLIISFNTKVLADAKAEIEKSDVKLLEGKIIYKLVEEHEEWTKEMEELM 459
           A +       N ++  FN +  A A+  +E+  + +    +IY ++E+ +   K +  ++
Sbjct: 688 ALA------SNAVLFGFNVRADAGARKIVEQEGLDMRYYNVIYDIIEDVK---KALTGML 738

Query: 460 KSDEINRLTKPAMIKILPNCIFRQ-KEPAVCGVEVLYGTLKIGSPI--MSEDGKKLGYVK 516
            SD    +   A ++     +FR  K  A+ G  V+ G +    PI  + ED        
Sbjct: 739 GSDVRENILGIAEVR----DVFRSPKFGAIAGCMVVEGVVHRNRPIRVLREDIVIFEGEL 794

Query: 517 EMRDNQQENIKEAKVGMQVPVSI 539
           E     +++  E + GM+  + +
Sbjct: 795 ESLRRFKDDASEVRAGMECGIGV 817