Pairwise Alignments

Query, 601 a.a., translation initiation factor IF-2 from Methanococcus maripaludis S2

Subject, 993 a.a., Translation initiation factor 2 from Variovorax sp. SCN45

 Score =  170 bits (431), Expect = 2e-46
 Identities = 159/459 (34%), Positives = 210/459 (45%), Gaps = 89/459 (19%)

Query: 7   RCPIVSVLGHVDHGKTSLLDKIRRTRVTQREAGGITQHIGASEIPINTIKKVSKDLLGLF 66
           R P+V+V+GHVDHGKTSLLD IRR +V   EAGGITQHIGA  +             G+ 
Sbjct: 494 RAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETER---------GM- 543

Query: 67  KADLSIPGILVIDTPGHEAFTSLRKRGGALADIAILVVDINEGFKPQTIEAINILKQCKT 126
                   +  +DTPGHEAFT++R RG    DI ILVV  ++G  PQT EAI   K    
Sbjct: 544 --------VSFLDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAGV 595

Query: 127 PFVVAANKVDRIPGWNSSEGPFILNFNEKNQHPNAMTEFEIRLYENVIKHLNELGFDADL 186
           P VVA NKVD+             N +   Q   A         E V+    E G D   
Sbjct: 596 PIVVAINKVDKPDA----------NLDRVKQELVA---------EEVVP--EEYGGD--- 631

Query: 187 FSRVKDTTKTINVVPVSAMTGEGVPDLLVIISGLAQRFLEQKLALNVEGYAKGTVLELKE 246
                     +  VPVSA TG+G+ DLL  +  L    LE K    V+  AKG V+E + 
Sbjct: 632 ----------VPFVPVSAKTGQGIDDLLEQVL-LQAEVLELKAP--VDAAAKGLVIEAQL 678

Query: 247 EKGLGKTIDAIIYDGIAKTGDFLVVGNPDGVLVSKIKALLKPKELDEMRDPKDKFKPS-- 304
           +KG G     ++  G  KTGD ++ G+  G    +++A+     LDE         PS  
Sbjct: 679 DKGRGPVATVLVQSGTLKTGDVVLAGSTYG----RVRAM-----LDEDGKATKAAGPSIP 729

Query: 305 KQISAATGVKISAPDLDSVIAG-------SPLRIVPKNQVEAAKEEVLEEVEEFTILTDD 357
            +I   T V   A D   V++        +  R       + AK +       FT L+  
Sbjct: 730 VEIQGLTEVP-QAGDEFMVMSDERRAREIATYRAGKFRNTKLAKAQAANLQNMFTDLSAG 788

Query: 358 E----GIIIKADTMGSLEALANELRK-----VNAKIKKAEVGDISKKDVIEASSYASTNP 408
           E     IIIKAD  GS EALA  L K     V  ++  A VG IS+ D+  A +      
Sbjct: 789 EVQTLRIIIKADVQGSQEALAQSLLKLATDEVKVQVVYAGVGGISESDINLAIA------ 842

Query: 409 LNGLIISFNTKVLADAKAEIEKSDVKLLEGKIIYKLVEE 447
              ++I FN +  A A+   E + V+L    IIY  V+E
Sbjct: 843 SKAVVIGFNVRADAGARKLAEGNGVQLNYYSIIYDAVDE 881