Pairwise Alignments

Query, 601 a.a., translation initiation factor IF-2 from Methanococcus maripaludis S2

Subject, 846 a.a., Translation initiation factor IF-2 from Pseudomonas putida KT2440

 Score =  156 bits (395), Expect = 3e-42
 Identities = 150/516 (29%), Positives = 227/516 (43%), Gaps = 95/516 (18%)

Query: 7   RCPIVSVLGHVDHGKTSLLDKIRRTRVTQREAGGITQHIGASEIPINTIKKVSKDLLGLF 66
           R P+V+V+GHVDHGKTSLLD IRR +V   EAGGITQHIGA  +  +          G+ 
Sbjct: 347 RAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETDR---------GM- 396

Query: 67  KADLSIPGILVIDTPGHEAFTSLRKRGGALADIAILVVDINEGFKPQTIEAINILKQCKT 126
                   +  +DTPGH AFT +R RG    DI ILVV  ++G  PQT EA+   K    
Sbjct: 397 --------VTFLDTPGHAAFTQMRARGAKATDIVILVVAADDGVMPQTREAVQHAKAAGV 448

Query: 127 PFVVAANKVDRIPGWNSSEGPFILNFNEKNQHPNAMTEFEIRLYENVIKHLNELGFDADL 186
           P VVA NK+D+ PG                               ++ +  NEL  +   
Sbjct: 449 PLVVAVNKIDK-PG------------------------------ADLDRIRNELSVEG-- 475

Query: 187 FSRVKDTTKTINVVPVSAMTGEGVPDLLVIISGLAQRFLEQKLALNVEGYAKGTVLELKE 246
               +D       V VSA  G GV +LL  +  L    LE        G  +G V+E + 
Sbjct: 476 -VTSEDWGGDTPFVKVSAKMGTGVDELLEAVL-LQAEILELTATPTAPG--RGVVVESRL 531

Query: 247 EKGLGKTIDAIIYDGIAKTGDFLVVGNPDGVLVSKIKALLKPKELDEMRDPKDKFKPS-- 304
           +KG G     ++ DG  + GD ++ G+  G    +++A+     LDE   P  +  PS  
Sbjct: 532 DKGRGPVATILVQDGTLRQGDMVLCGSNYG----RVRAM-----LDENGKPVKEAGPSIP 582

Query: 305 KQISAATGVKISAPDLDSVIAGSPLRIV------PKNQVEAAKEEVLEEVEEFTILTDDE 358
            +I    G   +  +L  V      R V         +V+ A+    +    F  +  +E
Sbjct: 583 VEILGLDGTPEAGDELSVVADEKKAREVALFRQGKYREVKLARAHAGKLENIFETMGQEE 642

Query: 359 ----GIIIKADTMGSLEALANEL-----RKVNAKIKKAEVGDISKKDVIEASSYASTNPL 409
                I++K D  GSLEAL   L      +V  ++    VG I++ D   A +       
Sbjct: 643 KKTLNIVLKTDVRGSLEALQGSLGGLGNDEVQVRVIGGGVGGITESDANLALA------S 696

Query: 410 NGLIISFNTKVLADAKAEIEKSDVKLLEGKIIYKLVEEHEEWTKEMEELMKSDEINRLTK 469
           N ++  FN +  A A+  +E+  + +    +IY ++E+ +   K +  ++ SD    +  
Sbjct: 697 NAVLFGFNVRADAGARKIVEQEGLDMRYYNVIYDIIEDVK---KALTGMLGSDVRENILG 753

Query: 470 PAMIKILPNCIFRQ-KEPAVCGVEVLYGTLKIGSPI 504
            A ++     +FR  K  A+ G  V+ GT+    PI
Sbjct: 754 VAEVR----DVFRSPKFGAIAGCMVIEGTVYRNRPI 785