Pairwise Alignments

Query, 153 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 375 a.a., Putative transmembrane protein from Variovorax sp. SCN45

 Score = 45.4 bits (106), Expect = 1e-09
 Identities = 36/151 (23%), Positives = 72/151 (47%), Gaps = 18/151 (11%)

Query: 6   DVMKR-PITLNKDDNIEKAISTFRENKISGAPVVEG-EKLVGILSESDIIKALT-SHDDR 62
           D+M R PI++     +++A +   E +I   P+ +   ++VGI++++D  + L   H + 
Sbjct: 232 DIMSREPISVEFGTPLQEAWALMHERRIKALPITDRTRRVVGIVTQADFFRQLDLQHHEG 291

Query: 63  FSLVLPSPFDLIELPLKTAIKIEEFKGDMENALKTEVFEAMTEKVVSVSSETPITNAAEI 122
            +  L    DLI           E  G +           MT +V   S++ P+ +   +
Sbjct: 292 IAGKLR---DLIRATRTVMSNKPEVVGQI-----------MTRQVRVASADRPVVDLVPL 337

Query: 123 MVKNKIKRLPVVEGEK-LAGIVTRGDLIEAM 152
             +     +P+++GEK LAG++T+ D + A+
Sbjct: 338 FSEGGHHHIPIIDGEKRLAGMITQSDFVRAL 368



 Score = 33.1 bits (74), Expect = 5e-06
 Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 9/106 (8%)

Query: 48  SESDIIKALTSHDDRFSLVLPSPFDLIELPLKTAIKIEEFKGDMENALKTEVFEAMTEKV 107
           S++DI   L     R++ VL    D+    L++ I+  E +            + M+ + 
Sbjct: 187 SQADIDAVLA----RYNQVL----DISRDDLESLIQQTELESYKRRLGTLHCADIMSREP 238

Query: 108 VSVSSETPITNAAEIMVKNKIKRLPVVE-GEKLAGIVTRGDLIEAM 152
           +SV   TP+  A  +M + +IK LP+ +   ++ GIVT+ D    +
Sbjct: 239 ISVEFGTPLQEAWALMHERRIKALPITDRTRRVVGIVTQADFFRQL 284