Pairwise Alignments
Query, 344 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2
Subject, 465 a.a., hypothetical protein from Pontibacter actiniarum KMM 6156, DSM 19842
Score = 107 bits (268), Expect = 5e-28
Identities = 72/313 (23%), Positives = 139/313 (44%), Gaps = 4/313 (1%)
Query: 30 DKGLELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESTECFDKALLID 89
DK L GN+ ++ N P++A++ + +G + G + + + F KAL
Sbjct: 71 DKAQLLAMSGNFEGALELINKVAEVEPENADVQLTRGIVYTQRGEFRAAIDYFKKALAYA 130
Query: 90 PENSEAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEAWKNKGITLNNMQRYSEAIDC 149
+ + + +G G A++ Y K + ++ EN A + ++ +E +
Sbjct: 131 DDRDDIYFNIGLAYQTWGKVASAIKYYKKCVELNQENEAAMQEVLYCMDLTNSVNEHLPF 190
Query: 150 FDKSISINAKNSDVWYNKGETQFKLGEYEKSIDSYNKALLIDEKMETALLGKGNSYLKLQ 209
F K + + + W+N G K+G Y+K+I +Y+ A +I TA N+ + L
Sbjct: 191 FQKFVDDDPYSYVAWFNLGNVYNKMGAYDKAIAAYDYATIIRPDFITAYNNMANAQVYLG 250
Query: 210 NYESAIECFNT-AETINPKSEYPPYYK-ADAYRDTENFEYALKYYDEALEINPSNSDILI 267
Y AIE FN E P +E Y + Y ++ + +YY ++++++P +
Sbjct: 251 EYTKAIESFNAMIEHGEPNAEV--YCNIGECYEKLLQWDLSRRYYQKSVDLDPEMDEAWF 308
Query: 268 SKGICLDKMKNYSAAISNFDLAIQLDPKNVQIWILKGNSYVGLKDYESSISCYKKALEIE 327
G+ LD + A+ F A++L + W+ + + S++ Y++A EI
Sbjct: 309 GIGVILDAQGKWYEAVHFFKKAVELYNDSADYWVALAAAEYHVGHVVSALESYERAAEIR 368
Query: 328 PKNENAKENIDII 340
P ++N N II
Sbjct: 369 PDDKNIYLNWSII 381
Score = 84.3 bits (207), Expect = 6e-21
Identities = 72/280 (25%), Positives = 120/280 (42%), Gaps = 2/280 (0%)
Query: 22 DQKSKSYNDKGLELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESTEC 81
D + Y + GL G +I Y + N ++ + E
Sbjct: 131 DDRDDIYFNIGLAYQTWGKVASAIKYYKKCVELNQENEAAMQEVLYCMDLTNSVNEHLPF 190
Query: 82 FDKALLIDPENSEAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEAWKNKGITLNNMQ 141
F K + DP + A+ LG V +K G Y KA+ YD + I + A+ N +
Sbjct: 191 FQKFVDDDPYSYVAWFNLGNVYNKMGAYDKAIAAYDYATIIRPDFITAYNNMANAQVYLG 250
Query: 142 RYSEAIDCFDKSISINAKNSDVWYNKGETQFKLGEYEKSIDSYNKALLIDEKMETALLGK 201
Y++AI+ F+ I N++V+ N GE KL +++ S Y K++ +D +M+ A G
Sbjct: 251 EYTKAIESFNAMIEHGEPNAEVYCNIGECYEKLLQWDLSRRYYQKSVDLDPEMDEAWFGI 310
Query: 202 GNSYLKLQNYESAIECFNTA-ETINPKSEYPPYYKADAYRDTENFEYALKYYDEALEINP 260
G + A+ F A E N ++Y A Y + AL+ Y+ A EI P
Sbjct: 311 GVILDAQGKWYEAVHFFKKAVELYNDSADYWVALAAAEYH-VGHVVSALESYERAAEIRP 369
Query: 261 SNSDILISKGICLDKMKNYSAAISNFDLAIQLDPKNVQIW 300
+ +I ++ I L + N+ A AI+L PK +++
Sbjct: 370 DDKNIYLNWSIILFEQGNFEEATDIILNAIELQPKEAELY 409
Score = 79.7 bits (195), Expect = 1e-19
Identities = 57/266 (21%), Positives = 117/266 (43%)
Query: 75 YGESTECFDKALLIDPENSEAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEAWKNKG 134
Y ++ D AL+ P ++E +L+ +GN++ ALE+ +K ++ EN++ +G
Sbjct: 48 YKKALAACDSALVQYPFSTELQIDKAQLLAMSGNFEGALELINKVAEVEPENADVQLTRG 107
Query: 135 ITLNNMQRYSEAIDCFDKSISINAKNSDVWYNKGETQFKLGEYEKSIDSYNKALLIDEKM 194
I + AID F K+++ D+++N G G+ +I Y K + ++++
Sbjct: 108 IVYTQRGEFRAAIDYFKKALAYADDRDDIYFNIGLAYQTWGKVASAIKYYKKCVELNQEN 167
Query: 195 ETALLGKGNSYLKLQNYESAIECFNTAETINPKSEYPPYYKADAYRDTENFEYALKYYDE 254
E A+ + + F +P S + + Y ++ A+ YD
Sbjct: 168 EAAMQEVLYCMDLTNSVNEHLPFFQKFVDDDPYSYVAWFNLGNVYNKMGAYDKAIAAYDY 227
Query: 255 ALEINPSNSDILISKGICLDKMKNYSAAISNFDLAIQLDPKNVQIWILKGNSYVGLKDYE 314
A I P + + Y+ AI +F+ I+ N +++ G Y L ++
Sbjct: 228 ATIIRPDFITAYNNMANAQVYLGEYTKAIESFNAMIEHGEPNAEVYCNIGECYEKLLQWD 287
Query: 315 SSISCYKKALEIEPKNENAKENIDII 340
S Y+K+++++P+ + A I +I
Sbjct: 288 LSRRYYQKSVDLDPEMDEAWFGIGVI 313
Score = 67.8 bits (164), Expect = 5e-16
Identities = 38/180 (21%), Positives = 87/180 (48%), Gaps = 1/180 (0%)
Query: 27 SYNDKGLELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESTECFDKAL 86
+YN+ G Y +I +N + +AE++ N G KL + S + K++
Sbjct: 238 AYNNMANAQVYLGEYTKAIESFNAMIEHGEPNAEVYCNIGECYEKLLQWDLSRRYYQKSV 297
Query: 87 LIDPENSEAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEAWKNKGITLNNMQRYSEA 146
+DPE EA+ G+G +L G + +A+ + K++ + +++++ W ++ A
Sbjct: 298 DLDPEMDEAWFGIGVILDAQGKWYEAVHFFKKAVELYNDSADYWVALAAAEYHVGHVVSA 357
Query: 147 IDCFDKSISINAKNSDVWYNKGETQFKLGEYEKSIDSYNKALLIDEKMETALLGKGNSYL 206
++ ++++ I + +++ N F+ G +E++ D A+ + K E L + +Y+
Sbjct: 358 LESYERAAEIRPDDKNIYLNWSIILFEQGNFEEATDIILNAIELQPK-EAELYYRACAYM 416
Score = 45.4 bits (106), Expect = 3e-09
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 234 YKADAYRDTENFEY--ALKYYDEALEINPSNSDILISKGICLDKMKNYSAAISNFDLAIQ 291
Y D Y T NFEY AL D AL P ++++ I K L N+ A+ + +
Sbjct: 37 YIIDHY--TANFEYKKALAACDSALVQYPFSTELQIDKAQLLAMSGNFEGALELINKVAE 94
Query: 292 LDPKNVQIWILKGNSYVGLKDYESSISCYKKALEIEPKNENAKENIDI 339
++P+N + + +G Y ++ ++I +KKAL ++ NI +
Sbjct: 95 VEPENADVQLTRGIVYTQRGEFRAAIDYFKKALAYADDRDDIYFNIGL 142
Score = 39.3 bits (90), Expect = 2e-07
Identities = 22/126 (17%), Positives = 61/126 (48%)
Query: 32 GLELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESTECFDKALLIDPE 91
G+ L QG + +++ + A+ SA+ WV + +G + E +++A I P+
Sbjct: 311 GVILDAQGKWYEAVHFFKKAVELYNDSADYWVALAAAEYHVGHVVSALESYERAAEIRPD 370
Query: 92 NSEAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEAWKNKGITLNNMQRYSEAIDCFD 151
+ + +L + GN+++A ++ ++ + + +E + + + +Y EA + +
Sbjct: 371 DKNIYLNWSIILFEQGNFEEATDIILNAIELQPKEAELYYRACAYMLSAGKYREAYNYLE 430
Query: 152 KSISIN 157
++ ++
Sbjct: 431 NALILD 436
Score = 31.2 bits (69), Expect = 6e-05
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 28 YNDKGLELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESTECFDKALL 87
Y + + L+ QGN+ ++ A+ PK AE++ +L G Y E+ + AL+
Sbjct: 375 YLNWSIILFEQGNFEEATDIILNAIELQPKEAELYYRACAYMLSAGKYREAYNYLENALI 434
Query: 88 ID 89
+D
Sbjct: 435 LD 436