Pairwise Alignments

Query, 344 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 197 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

 Score = 87.0 bits (214), Expect = 3e-22
 Identities = 60/217 (27%), Positives = 109/217 (50%), Gaps = 29/217 (13%)

Query: 128 EAWKNKGITLNNMQRYSEAIDCFDKSISINAKNSDVWYNKGETQFKLGEYEKSIDSYNKA 187
           + W + G  L N ++Y+EA++C+DK +S    +    + KG    KL EYEK++  +N  
Sbjct: 8   QKWHSHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSV 67

Query: 188 LLIDEKMETALLGKGNSYLKLQNYESAIECFNTAETINPKSEYPPYYKADAYRDTENFEY 247
           L ++     A+  K     KL+  ES  E +N    +  ++     YK        NFE 
Sbjct: 68  LNMNPSYIPAIKNKKQVEEKLKKQES--ENYNKFSKLGVEN-----YKQG------NFEK 114

Query: 248 ALKYYDEALEINPSNSDILISKGICLDKMKNYSAAISNFDLAIQLDPKNVQIWILKGNSY 307
           +L Y+++A EINP +  +  +      K+K          L I+ + K V+        Y
Sbjct: 115 SLSYFEKAFEINPYSETLRKNIETTRLKLKEI--------LPIRWNNKGVE--------Y 158

Query: 308 VGLKDYESSISCYKKALEIEPKNENAKENIDIIEKII 344
             +K+Y+ ++ C++KA+++ PK E+A +N  +++K+I
Sbjct: 159 YKVKNYQKALECFEKAVKLNPKFESALKNKTMVQKLI 195



 Score = 77.8 bits (190), Expect = 2e-19
 Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 31/195 (15%)

Query: 53  LENPKSAEIWVNKGNSLLKLGIYGESTECFDKALLIDPENSEAFNGLGTVLSKTGNYQKA 112
           + N    + W + G  L     Y E+ EC+DK L   P++  A  G G V  K   Y+KA
Sbjct: 1   MRNNYGIQKWHSHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKA 60

Query: 113 LEMYDKSLNIDSENSEAWKNKGITLNNMQRYSEAIDCFDKSISINAKNSDVWYNKGETQF 172
           L+ ++  LN++     A KNK      +++               ++N + +   G   +
Sbjct: 61  LQCFNSVLNMNPSYIPAIKNKKQVEEKLKKQ-------------ESENYNKFSKLGVENY 107

Query: 173 KLGEYEKSIDSYNKALLID-------EKMETALL-----------GKGNSYLKLQNYESA 214
           K G +EKS+  + KA  I+       + +ET  L            KG  Y K++NY+ A
Sbjct: 108 KQGNFEKSLSYFEKAFEINPYSETLRKNIETTRLKLKEILPIRWNNKGVEYYKVKNYQKA 167

Query: 215 IECFNTAETINPKSE 229
           +ECF  A  +NPK E
Sbjct: 168 LECFEKAVKLNPKFE 182



 Score = 63.9 bits (154), Expect = 3e-15
 Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 39/185 (21%)

Query: 26  KSYNDKGLELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESTECFDKA 85
           + ++  G  L N   Y +++  Y+  L   P        KG   LKL  Y ++ +CF+  
Sbjct: 8   QKWHSHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSV 67

Query: 86  LLIDP---------------------ENSEAFNGLGTVLSKTGNYQKALEMYDKSLNIDS 124
           L ++P                     EN   F+ LG    K GN++K+L  ++K+  I+ 
Sbjct: 68  LNMNPSYIPAIKNKKQVEEKLKKQESENYNKFSKLGVENYKQGNFEKSLSYFEKAFEINP 127

Query: 125 ------ENSEA------------WKNKGITLNNMQRYSEAIDCFDKSISINAKNSDVWYN 166
                 +N E             W NKG+    ++ Y +A++CF+K++ +N K      N
Sbjct: 128 YSETLRKNIETTRLKLKEILPIRWNNKGVEYYKVKNYQKALECFEKAVKLNPKFESALKN 187

Query: 167 KGETQ 171
           K   Q
Sbjct: 188 KTMVQ 192