Pairwise Alignments

Query, 344 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 388 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

 Score =  134 bits (338), Expect = 3e-36
 Identities = 93/339 (27%), Positives = 152/339 (44%), Gaps = 34/339 (10%)

Query: 26  KSYNDKGLELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESTECFDKA 85
           K   + G E YN G Y  SI  +N  L   PK+ + W  KGN+   LG    + + ++KA
Sbjct: 13  KKLLETGTEYYNSGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSYEKA 72

Query: 86  LLIDPENSEAFNG-------------------------------LGTVLSKTGNYQKALE 114
           L I P + E                                   LG    KTG + +A+ 
Sbjct: 73  LSIRPNDLEIIKSYTMLLNSLELFKESVEILKNVSESDDKIIEILGDAYLKTGKFNEAIL 132

Query: 115 MYDKSLNIDSENSEAWKNKGITLNNMQRYSEAIDCFDKSISINAKNSDVWYNKGETQFKL 174
            Y+  L       E    KG  L  ++++ EA++ ++K + I+  +++VW N G   + +
Sbjct: 133 QYNNILERKPRYKEILAKKGTALVGLKKFDEALEIYEKVLKISPYDTEVWKNIGNAFYTV 192

Query: 175 GEYEKSIDSYNKALLIDEKMETALLGKGNSYLKLQNYESAIECFNTAETINPKSEYPPYY 234
            +YEK+I  Y+  L   +      L KG++  KL     A++ + T         Y P+ 
Sbjct: 193 KKYEKAIQFYDMYLNEHKGDFGVTLSKGDALRKLGKTNEALDLY-TKVLEKHIQNYEPWC 251

Query: 235 KAD-AYRDTENFEYALKYYDEALEINPSNSDILISKGICLDKMKNYSAAISNFDLAIQLD 293
           +    Y DTE++E A+ Y + A E NP N  IL+  G    K++NY+  +   + A+  D
Sbjct: 252 RVGLLYYDTEDYETAIYYLELANERNPLNPSILVKLGRTYVKLRNYNKGLEFMEKALDKD 311

Query: 294 PKNVQIWILKGNSYVGLKDYESSISCYKKALEIEPKNEN 332
            +  + W  KG     L+ +  +I CYKKA+ I  KN++
Sbjct: 312 SEYAKAWCYKGYILNLLERHYEAIDCYKKAISIN-KNDS 349



 Score = 80.9 bits (198), Expect = 5e-20
 Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 34/206 (16%)

Query: 20  IGDQKSKSYNDKGLELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGEST 79
           I    ++ + + G   Y    Y  +I  Y++ L E+     + ++KG++L KLG   E+ 
Sbjct: 174 ISPYDTEVWKNIGNAFYTVKKYEKAIQFYDMYLNEHKGDFGVTLSKGDALRKLGKTNEAL 233

Query: 80  ECFDKALLIDPENSEAFNGLG---------------------------TVLSKTG----- 107
           + + K L    +N E +  +G                           ++L K G     
Sbjct: 234 DLYTKVLEKHIQNYEPWCRVGLLYYDTEDYETAIYYLELANERNPLNPSILVKLGRTYVK 293

Query: 108 --NYQKALEMYDKSLNIDSENSEAWKNKGITLNNMQRYSEAIDCFDKSISINAKNSDVWY 165
             NY K LE  +K+L+ DSE ++AW  KG  LN ++R+ EAIDC+ K+ISIN  +S  W 
Sbjct: 294 LRNYNKGLEFMEKALDKDSEYAKAWCYKGYILNLLERHYEAIDCYKKAISINKNDSKFWM 353

Query: 166 NKGETQFKLGEYEKSIDSYNKALLID 191
           +       +G+ + S ++Y  A+ ++
Sbjct: 354 HLSNVYKTIGKEDYSKEAYENAVNLE 379



 Score = 65.1 bits (157), Expect = 3e-15
 Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 11/174 (6%)

Query: 168 GETQFKLGEYEKSIDSYNKALLIDEKMETALLGKGNSYLKLQNYESAIECFNTAETINPK 227
           G   +  G+Y+KSI+ +NK L  + K   A   KGN+Y  L   + A + +  A +I P 
Sbjct: 19  GTEYYNSGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSYEKALSIRPN 78

Query: 228 SEYPPYYKADAYRDTENFEYALKYYDEALEI--NPSNSD--ILISKGICLDKMKNYSAAI 283
                    +  +       +L+ + E++EI  N S SD  I+   G    K   ++ AI
Sbjct: 79  D-------LEIIKSYTMLLNSLELFKESVEILKNVSESDDKIIEILGDAYLKTGKFNEAI 131

Query: 284 SNFDLAIQLDPKNVQIWILKGNSYVGLKDYESSISCYKKALEIEPKNENAKENI 337
             ++  ++  P+  +I   KG + VGLK ++ ++  Y+K L+I P +    +NI
Sbjct: 132 LQYNNILERKPRYKEILAKKGTALVGLKKFDEALEIYEKVLKISPYDTEVWKNI 185



 Score = 53.1 bits (126), Expect = 1e-11
 Identities = 31/129 (24%), Positives = 65/129 (50%)

Query: 32  GLELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESTECFDKALLIDPE 91
           GL  Y+  +Y  +I    LA   NP +  I V  G + +KL  Y +  E  +KAL  D E
Sbjct: 254 GLLYYDTEDYETAIYYLELANERNPLNPSILVKLGRTYVKLRNYNKGLEFMEKALDKDSE 313

Query: 92  NSEAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEAWKNKGITLNNMQRYSEAIDCFD 151
            ++A+   G +L+    + +A++ Y K+++I+  +S+ W +       + +   + + ++
Sbjct: 314 YAKAWCYKGYILNLLERHYEAIDCYKKAISINKNDSKFWMHLSNVYKTIGKEDYSKEAYE 373

Query: 152 KSISINAKN 160
            ++++   N
Sbjct: 374 NAVNLENHN 382