Pairwise Alignments
Query, 892 a.a., right-handed parallel beta-helix repeat-containing protein from Methanococcus maripaludis S2
Subject, 3824 a.a., T1SS secreted agglutinin RTX from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
Score = 53.9 bits (128), Expect = 2e-10
Identities = 113/551 (20%), Positives = 202/551 (36%), Gaps = 70/551 (12%)
Query: 390 SENIDNIPLAPDSVPPVVSIVSPRENAFFGENETILVDVSVTDNSEIHSVMLEVDNSYK- 448
S +D P A P + V+P T + + EI S ++ +N +
Sbjct: 1334 SVTLDTQPPAQPDAPLISDNVAPVIGNIGNNGATNDTTPTFSGTGEIGSTIILYNNGSEI 1393
Query: 449 -EIMVQNGTTYSKSLDNLDYGAHTIKIYAEDAVGNVNFFESRVFSISTPDSTPPEVRIIS 507
V + +++ + L +TI + D GN++ + V T D+T P +I+
Sbjct: 1394 GRTTVGDNGSWNFTPAALTPETYTITVTETDRAGNISPPSASV--TFTLDTTAPANPVIT 1451
Query: 508 PVSKSYAEGSEVSIKVQITDESD--------------IYSAYAKIDDYTVDLIESNGYYI 553
+ E + + TD++ +Y+ + + TVD E+ + +
Sbjct: 1452 FAEDNVGEVQDTIVSGATTDDNTPVIHGTGDIGSIITLYNGSSVLGVVTVD--ETGTWTL 1509
Query: 554 NILDNLEWGAHTLWIIVTDAAGNSN-YNEKVTFDVNEGDITPPEV-EIIE-------PEI 604
+ L G +TL I DAAGNS+ + TF V+ + PP V EI++ P
Sbjct: 1510 PVTSALPDGVYTLTAIAADAAGNSSGVSNSFTFTVDTVPLQPPVVNEILDDVAPVTGPLT 1569
Query: 605 GDSFEENVSIKVSATDDSGIDSVKVMLDEKVSF-TLTKNSEYYTGTLTDLSYGIHTLRVY 663
+F + ++ ++ + ++G S + D V+ T +T +LS H L
Sbjct: 1570 DGAFTNDRTLTINGSGENG--STVTIYDNGVAIGTALVTDGVWTFNTPELSEASHALTFS 1627
Query: 664 AEDNEENINSDE---VIQFEIEVPDYSYTKPTTDNTQEPAETSNP---------ENKTTD 711
A D+ N + I +I P + D+ A ++P +
Sbjct: 1628 ATDDAGNTTAQTQPITITVDITAPPAPTVQTVDDDGTRVAGIADPYATVEIHHIDGTLVG 1687
Query: 712 TPLNNETGE--ITPNESENESNGEIENNTNESQNSETQNNTDAGDEGNIS---------D 760
+ + N TGE +T + ++ + + + N+ N A D G + D
Sbjct: 1688 SAVANGTGEFVVTLSPAQTDGGTLTAIAIDRAGNNGPATNFPASDSGLPAVPAITAIEDD 1747
Query: 761 NPSENDSPLEHEDTSDTEPDNNDEGAEDSGDTTSE--TGDATGEEPTETSDDEPSETPPE 818
S + T DT P G D G T GD+ G + S + E
Sbjct: 1748 VGSVQGNIAAGGATDDTTP--TLRGTTDIGSTVEVFIDGDSAGFATVDASGNWIFEIATP 1805
Query: 819 TEDTTGDESSDTTSDDNSGGESESNSETED---------SETSDDEP--SDSSSESESNS 867
++T + T+ + GG S T D + +DD P + + +
Sbjct: 1806 LSESTHYFTVQATNANGPGGLSAPVGITVDLSAPAQPVITSATDDVPGMTGTLDNGALTN 1865
Query: 868 DASPEDNSDGE 878
D+ P N GE
Sbjct: 1866 DSRPTLNGTGE 1876
Score = 53.5 bits (127), Expect = 2e-10
Identities = 130/580 (22%), Positives = 210/580 (36%), Gaps = 76/580 (13%)
Query: 375 DTNGDTLSETYYELNSENIDNIPLAPDSVPPVVSIVSPRENAFFGENETILVDVSVTDNS 434
D G+T + + E+ S ID A + V P T ++
Sbjct: 2236 DAAGNTSAAS--EIRSFTIDTTAPAAPVIDTVYDGTGPITGNLSSGQITDEARPVISGTR 2293
Query: 435 EIHSVMLEVDNS--YKEIMVQNGTTYSKSLD-NLDYGAHTIKIYAEDAVGNVNFFESRVF 491
E ++ + DN EI N +++ + D +L G H I + A DA GN + V
Sbjct: 2294 ETNTTIRLYDNGTLLAEIPADNSSSWRYTPDASLATGNHVITVIAVDAAGNASPVSDSVN 2353
Query: 492 SISTPDSTPPEVRIISPVSKSYAEGSEVSIKVQIT-DESDIYSAYAKIDDYTVDLIES-- 548
+ D+TPP +I+ VS A G Q T D + +S A+ T+ L E+
Sbjct: 2354 FVV--DTTPPLTPVITSVSDDQAPGLGTIANGQNTNDPTPTFSGTAEAGA-TITLYENGT 2410
Query: 549 ---------NGYYINILDNLEWGAHTLWIIVTDAAGNSNYNEKV-TFDVNEGDITPPEVE 598
+G + L G H + + TDAAGNS+ N T V D T P+
Sbjct: 2411 VIGTTTAQPDGAWSVSTSTLASGTHVITAVATDAAGNSSPNSTAFTLTV---DTTAPQTP 2467
Query: 599 IIEPEIGD------------SFEENVSIKVSATDDSGIDSVKVMLDEKVSFTLTK---NS 643
I+ + D + ++ T ++G SV + D +T +
Sbjct: 2468 ILTSVVDDVAGGVTGNLANGQITNDNRPTLNGTAEAG--SVVSIYDGDTLLGVTSANASG 2525
Query: 644 EYYTGTLTDLSYGIHTLRVYAEDNEENINSDEVIQFEIEVPDYSYTKP-----TTDNTQE 698
+ T L+ G TL V A D N+ S F I V + T P D
Sbjct: 2526 AWSFTPTTGLNDGTRTLTVTATDPAGNV-SPATSGFTIVVDTLAPTVPLITSIVDDVPNN 2584
Query: 699 PAETSNPENKTTDTPLNNETGEITPNESENESNGEIEN-NTNES------------QNSE 745
N ++ P N T E S ++ + N N S Q S
Sbjct: 2585 TGAIGNGQSTNDTQPTLNGTAEANSAVSIFDNGALVATVNANASGNWSWTPTAALGQGSH 2644
Query: 746 TQNNTDAGDEGNIS-DNPS-----ENDSPLEHEDTSDTEPDNNDEGAEDSGDT---TSET 796
+ + A GN+S +PS + +P + N G ++G T TSET
Sbjct: 2645 AYSVSAADAAGNVSAASPSITIIVDTIAPGAPGNLVINATGNRVTGTAEAGSTVTITSET 2704
Query: 797 GDATGEEPTETSDDEPSETPPETEDTTGDESSDTTSDDNSGGESESNSETEDSETSDDEP 856
G G T T+D S T T T + + D +G + T + P
Sbjct: 2705 GVVLG---TATADGTGSFTATLTPAQTNGQPLLAFAQDKAGNTGIAAGFTAPDTRVPEAP 2761
Query: 857 SDSSSESE----SNSDASPEDNSDGETSDNSPEESGDSVA 892
++ + + + A+ + +D + + N ++G +V+
Sbjct: 2762 IITNVVDDVGIYTGAIANGQVTNDAQPTLNGTAQAGATVS 2801
Score = 41.2 bits (95), Expect = 1e-06
Identities = 103/440 (23%), Positives = 167/440 (37%), Gaps = 56/440 (12%)
Query: 465 LDYGAHTIKIYAEDAVGNVNFFESRVFSISTPDSTPPEVRIISPVSKSYAEGSEVSIKVQ 524
L+ AH A D GN S F+++ D+ P+V +I+ V + + + Q
Sbjct: 1909 LESNAHIFTAVATDPAGNSGQ-PSDGFTLNI-DAQAPDVPVITSVIDDNNQPTVPVLPGQ 1966
Query: 525 ITDESDIY-------SAYAKIDDY-----TVDLIESNGYYINILDNLEWGAHTLWIIVTD 572
TD+ A I D T + E+ + + NL G+H L + TD
Sbjct: 1967 STDDRQPILNGTGEPGATITIFDNGTPLGTAQVGENGSWTFPVPRNLSEGSHNLTVSATD 2026
Query: 573 AAGN-SNYNEKVTFDVNEGDITPPEVEIIEPEIGD-----------SFEENVSIKVSATD 620
AGN S + T V DITPP + ++ + D + + ++
Sbjct: 2027 PAGNTSAVSAPWTIVV---DITPPAIPVLTSVVDDQPGITGNLVSGQLTNDATPTLNGRG 2083
Query: 621 DSGIDSVKVMLDEKVSF--TLTKNSE--YYTGTLTDLSYGIHTLRVYAED---NEENINS 673
++G ++ V LD + T T NS+ + T L+ G HT + A D N ++S
Sbjct: 2084 EAGA-TINVYLDGNPASIGTTTVNSDGTWSFTPQTPLANGSHTFTLSATDPAGNSSAVSS 2142
Query: 674 DEVIQFEIEVPDYSYTKPTTDNTQEPAETSNPENKTTDTPLNNETGEITPNESENESNGE 733
V+ + P DNT P P +T NET E +
Sbjct: 2143 GFVLTIDATPPAAPVIASVADNT-APVTGIVPNGGST-----NETRPTLSGTGEAGTTIS 2196
Query: 734 IENNTNESQNSETQNNTDAGDEGNISDNPSEN-DSPLEHEDTSDTEPDNNDEGAEDSGDT 792
I N + ++ Q N G+ S PS + + + + + T+ N A +
Sbjct: 2197 IYNGSALVGTAQVQAN------GSWSFTPSTSLGAGVWNLTATATDAAGNTSAASEIRSF 2250
Query: 793 TSETGDATGEEPTETSDDEPSETPPETEDTTGDESSDTTSDDNSG-GESESNSETEDSET 851
T +T A +T D T P T + + + +D SG E+ + D+ T
Sbjct: 2251 TIDT-TAPAAPVIDTVYD---GTGPITGNLSSGQITDEARPVISGTRETNTTIRLYDNGT 2306
Query: 852 SDDE-PSDSSSESESNSDAS 870
E P+D+SS DAS
Sbjct: 2307 LLAEIPADNSSSWRYTPDAS 2326
Score = 35.4 bits (80), Expect = 7e-05
Identities = 108/531 (20%), Positives = 193/531 (36%), Gaps = 89/531 (16%)
Query: 376 TNGDTLSETYYEL-NSENIDNIPLAPDSVPPVVS---IVSPRENAFFGENET-ILVDVSV 430
TNG L T ++ +E+ +APDS P + ++S + G E + ++
Sbjct: 813 TNGQALIATATDVAKNESAAATVIAPDSTAPEMPKNVVISEDGTSISGTAEPGSAITIAT 872
Query: 431 TDNSEIHSVMLEVDNSYKEIMVQNGTTYSKSLDNLDYGAHTIKIYAEDAVGNVNFFESRV 490
D + S + + + +V T + + A D+ NV S
Sbjct: 873 PDGKPLGSGKADGEGHFTLPLVPAQTN-----------GEQVTVTATDSANNV----SPP 917
Query: 491 FSISTPDSTPPEVRIISPVSKSYAEGSEVSIKVQITDE-----SDIYSAYAKIDDYT--- 542
+ PD T P+ II+ V + + Q T++ S A A+++ +
Sbjct: 918 TTAQAPDITAPDKPIITQVLDDVESFTGPLVNGQTTNDNRPTLSGTAEAGARVEVFDNGF 977
Query: 543 ---VDLIESNGYY-INILDNLEWGAHTLWIIVTDAAGNSNYNEKVTFDVNEGDITPPEVE 598
+ ++ NG + NL GAH L +I TDA GN+ ++ +FD+
Sbjct: 978 SLGLATLQPNGAWTFTPSQNLGEGAHRLTVIATDAKGNA--SQAASFDL----------- 1024
Query: 599 IIEPEIGDSFEENVSIKVSATDDSGIDSVKVMLDEKVSFTLTKNSEYYTGTLTDLSYGIH 658
+ D+ + TDD+ +L LT +S T T+
Sbjct: 1025 -----VVDTQSPQQPVITFITDDA-----PGILGSVAHLGLTNDS---TPTINGTGEPGS 1071
Query: 659 TLRVYAEDNEENINSDEVIQFEIEVPDYSYTKPTTDNTQEPAETSNPENKTTDTPLNNET 718
T+ +Y + ++I V Y+Y TT +PL ++T
Sbjct: 1072 TVHLY----QNGARIADIIVGNSGVWSYAY--------------------TTASPLADDT 1107
Query: 719 GEITPNESENESNGEIENNTNESQNSETQNNTDAGDEGNISDNPSENDSPLEHEDTSDTE 778
T S++ N +T+ + +TQ G G + + D+ ++ T +++
Sbjct: 1108 YTFTVTASDSNGN-TTPFSTDFTITIDTQAPAAPGVIGVADGDGNTIDT---NQITQESQ 1163
Query: 779 PDNNDEGAEDSGDTTSETGDATGEEPTETSDDEPSETPPETEDTTGDESSDTTSDDNSGG 838
P + G + G+A G+ T D TPP GD ++D +G
Sbjct: 1164 PRLSGSGTAGDTIILYDNGNAIGQALVGT-DGRWQFTPPAALG-DGDHLLTARANDPAGN 1221
Query: 839 ES-ESNSETEDSETSDDEPSDSSSESESNSDASPEDNSDGETSDNSPEESG 888
ES ES S T +T + S + + + + T+ P SG
Sbjct: 1222 ESPESISFTLRIDTQAPDAPQIVSAAITGGEGEVLLANGSITNQRMPTLSG 1272
Score = 33.5 bits (75), Expect = 3e-04
Identities = 86/407 (21%), Positives = 141/407 (34%), Gaps = 42/407 (10%)
Query: 468 GAHTIKIYAEDAVGNVNFFESRVFSISTPDSTPPEVRIISPVSKSYAEGSEVSIKVQITD 527
G H + A D GN + ES F++ P +I+S EG + IT+
Sbjct: 1207 GDHLLTARANDPAGNESP-ESISFTLRIDTQAPDAPQIVSAAITG-GEGEVLLANGSITN 1264
Query: 528 E-----------SDIYSAYAK-IDDYTVDLIESNGYYINILDNLEWGAHTLWIIVTDAAG 575
+ I + Y ++ TV + + + NL G + L TDAAG
Sbjct: 1265 QRMPTLSGTGEPGTIITLYNNGVELATVQVNPQGSWTYPLTRNLSEGLNILTATATDAAG 1324
Query: 576 NSNYNE---KVTFDVN-----EGDITPPEVEIIEPEIGDSFEEN-VSIKVSATDDSGIDS 626
NS+ VT D + + V + IG++ N + S T + G
Sbjct: 1325 NSSPTSGVFSVTLDTQPPAQPDAPLISDNVAPVIGNIGNNGATNDTTPTFSGTGEIGSTI 1384
Query: 627 VKVMLDEKVSFTLTKNSEYYTGTLTDLSYGIHTLRVYAEDNEENI---NSDEVIQFEIEV 683
+ ++ T ++ + T L+ +T+ V D NI ++ +
Sbjct: 1385 ILYNNGSEIGRTTVGDNGSWNFTPAALTPETYTITVTETDRAGNISPPSASVTFTLDTTA 1444
Query: 684 PDYSYTKPTTDNTQEPAETSNPENKTTD-TPLNNETGEITPNESENESNGEIENNTNESQ 742
P DN E +T T D TP+ + TG+I + + + T +
Sbjct: 1445 PANPVITFAEDNVGEVQDTIVSGATTDDNTPVIHGTGDIGSIITLYNGSSVLGVVTVDET 1504
Query: 743 NSETQNNTDAGDEGNISDNPSENDSPLEHEDTSDTEPDNNDEGAEDSGDTTSETGDATGE 802
+ T T A +G + D+ N G +S T +T
Sbjct: 1505 GTWTLPVTSALPDGVYTLTAIAADAA------------GNSSGVSNSFTFTVDTVPLQPP 1552
Query: 803 EPTETSDDEPSETPPETEDTTGDESSDTTSDDNSGGESESNSETEDS 849
E DD T P T+ G ++D T N GE+ S D+
Sbjct: 1553 VVNEILDDVAPVTGPLTD---GAFTNDRTLTINGSGENGSTVTIYDN 1596
Score = 33.1 bits (74), Expect = 3e-04
Identities = 34/126 (26%), Positives = 49/126 (38%), Gaps = 11/126 (8%)
Query: 453 QNGTTYSKSLDNLDYGAHTIKIYAEDAVGNVNFFESRVFSIST--PDSTPPEVRIISPVS 510
+NG L G HT + D GN SRV + T D+TPP+ II V+
Sbjct: 437 ENGRWTFTPTTPLSDGEHTFTVEQSDKAGNT----SRVTTTPTIIVDTTPPDAAIIDNVA 492
Query: 511 KSYAEGSEVSIKVQITDESDIYSAYAKIDDYTVDLIESNGYYINILDNLEWGAHTLWIIV 570
K +G+ VS + IY T+ N ++ L+ + L +
Sbjct: 493 K---DGTTVSGTAEAGSTVSIYDPAGNYLGSTI--TGENNHFSITLNPAQTHGERLEARI 547
Query: 571 TDAAGN 576
DA GN
Sbjct: 548 QDAVGN 553