Pairwise Alignments

Query, 262 a.a., tRNA pseudouridine(38-40) synthase TruA from Methanococcus maripaludis S2

Subject, 252 a.a., tRNA pseudouridine(38-40) synthase (EC 5.4.99.12) from Sphingobium sp. HT1-2

 Score = 47.8 bits (112), Expect = 2e-10
 Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 37/213 (17%)

Query: 2   YIFKIAYDGK--LSFQTQPHGETVCDKISNALLDCGYLDNKDRVPLYHGGRTDRGVAALG 59
           + F + +DG+  + +Q Q HG +V   I +A+         +R  L+  GRTD GV  L 
Sbjct: 4   FAFTVEFDGRPFMGWQRQAHGPSVQQAIEDAINAV----TGERAILHAAGRTDAGVHGLA 59

Query: 60  NYVVYEMDKKPVLP-----RVQSKLKWDGIWVLGCKKIEIFPE------IEHRHYQYTLP 108
                +++ KP+ P      + +KL+   + +L C+  E+ P+         R Y Y + 
Sbjct: 60  MRAHADVE-KPLTPFRLMEAINAKLRPHPVAILACE--EVAPDWHARFSCTGRAYIYRIA 116

Query: 109 NKNH----------------DVELMKKASEKLIGTHYFQNLSKRDKTKVKDPVRTLYDIK 152
           N+                  D + M  A++ L+G H F    +    +   P+++L  + 
Sbjct: 117 NRRAPLTLESGLAWRVIQPLDADAMHDAAQILVGHHDFTTF-RSIHCQAASPLKSLAMLD 175

Query: 153 ISSNDYFITIDIFGESFLWNMVRRIIRLLSDIG 185
           +      I I     SFL + VR ++  L+ +G
Sbjct: 176 VERQGDRIAIRAEARSFLHHQVRSMVGCLAMVG 208