Pairwise Alignments

Query, 262 a.a., tRNA pseudouridine(38-40) synthase TruA from Methanococcus maripaludis S2

Subject, 286 a.a., tRNA pseudouridine (38-40)synthase from Pseudomonas putida KT2440

 Score = 51.2 bits (121), Expect = 2e-11
 Identities = 34/124 (27%), Positives = 66/124 (53%), Gaps = 4/124 (3%)

Query: 100 HRHYQYTLPNKNHDVELMKKASEKLIGTHYFQNLSKRDKTKVKDPVRTLYDIKISSNDYF 159
           H   + T  ++  DV+ M +A++ L+GTH F    +  + + K P++ +Y ++++ +   
Sbjct: 141 HLAEEVTWNHRPLDVDRMAEAAQYLLGTHDFSAF-RASQCQAKSPIKHIYHLRVTRHGQM 199

Query: 160 ITIDIFGESFLWNMVRRIIRLLSDIGKHKIENPEKFI-ELILSEDYKKGYPPSPAEGLIL 218
           I +D+   +FL +MVR I  +L  IG    E P  +  E++   + ++G   +   GL L
Sbjct: 200 IVLDVRATAFLHHMVRNIAGVLMAIGAG--ERPVAWAREVLEGRNRREGGVTAHPYGLYL 257

Query: 219 VDVK 222
           V V+
Sbjct: 258 VQVE 261