Pairwise Alignments

Query, 262 a.a., tRNA pseudouridine(38-40) synthase TruA from Methanococcus maripaludis S2

Subject, 256 a.a., tRNA pseudouridine(38-40) synthase TruA from Magnetospirillum magneticum AMB-1

 Score = 52.8 bits (125), Expect = 7e-12
 Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 44/252 (17%)

Query: 2   YIFKIAYDGKL--SFQTQPHGETVCDKISNALLD-CGYLDNKDRVP--LYHGGRTDRGVA 56
           Y   + YDG     +Q Q  G +V   +  A+   CG       VP  L+  GRTD GV 
Sbjct: 4   YRLLVEYDGTPFNGWQRQDKGLSVQGILEKAVEKLCG-------VPCTLHAAGRTDAGVH 56

Query: 57  ALGNYVVYEMDKKPVLPRVQSKLKWD----GIWVLGCKKIEIFPEIEH-------RHYQY 105
           A G     ++ +      V+  L +      + V+     E+  E  H       R Y Y
Sbjct: 57  ATGQVAHVDLPRDYPADTVRDALNYHMKPKPVAVVAA---ELVDEDFHARFSAVGRAYLY 113

Query: 106 TLPNKNH----------------DVELMKKASEKLIGTHYFQNLSKRDKTKVKDPVRTLY 149
            + N+                  D E M + + +L+G H F    +  + + K P++TL 
Sbjct: 114 RIVNRRAPLALDQHRAWWVPVALDAEAMAEGARRLLGHHDFSTF-RASECQAKSPMKTLD 172

Query: 150 DIKISSNDYFITIDIFGESFLWNMVRRIIRLLSDIGKHKIENPEKFIELILSEDYKKGYP 209
            + ++     I I     SFL + VR ++  L  +G+ K  +P+   +++ + D  KG P
Sbjct: 173 VLDVTRVGEEIRIVAEARSFLHHQVRNMVGTLKLVGEGKW-SPDDMAKVLEARDRTKGGP 231

Query: 210 PSPAEGLILVDV 221
            +PA GL+L  V
Sbjct: 232 TAPAAGLVLTGV 243