Pairwise Alignments

Query, 262 a.a., tRNA pseudouridine(38-40) synthase TruA from Methanococcus maripaludis S2

Subject, 276 a.a., tRNA pseudouridine(38-40) synthase TruA from Dickeya dianthicola ME23

 Score = 55.5 bits (132), Expect = 1e-12
 Identities = 57/250 (22%), Positives = 101/250 (40%), Gaps = 49/250 (19%)

Query: 6   IAYDGKLSFQTQPHGETVCDKISNALLDCGYLDNKDRVPLYHGGRTDRGVAALGNYVVYE 65
           I YDG   +  Q   E   D +   L         +R+ ++  GRTD GV A G  V + 
Sbjct: 19  IEYDGSRYYGWQRQAEV--DSVQGCLEAALSQVANERIDVFCAGRTDAGVHATGQVVHF- 75

Query: 66  MDKKPVLPRVQSKLKWDGIWVLGCKK----------IEIFPEIEH-------RHYQYTLP 108
                    +    + D  W +G             ++   +  H       R Y+Y + 
Sbjct: 76  ---------ITRAARKDAAWTMGVNANLPPDIAVRWVKTVDDAFHARFSATARRYRYVIY 126

Query: 109 NKNH----------------DVELMKKASEKLIGTHYFQNLSKRDKTKVKDPVRTLYDIK 152
           N+                  D E M +A + L+G + F +  +  + + + P R L  ++
Sbjct: 127 NRRFRPAILSRGVTHYYLPLDAERMHRAGQCLLGENDFTSF-RAVQCQSRTPWRNLMHLR 185

Query: 153 ISSNDYFITIDIFGESFLWNMVRRIIRLLSDIGKHKIENPEKFI-ELILSEDYKKGYPPS 211
           ++    ++ +DI   +F+ +MVR I+  L +IG      PE ++ EL+ ++D       +
Sbjct: 186 VARQGDYVVVDIKANAFVHHMVRNIVGSLMEIGCG--NQPENWMAELLAAKDRTLAAATA 243

Query: 212 PAEGLILVDV 221
            A+GL LV V
Sbjct: 244 KADGLYLVSV 253