Pairwise Alignments

Query, 262 a.a., tRNA pseudouridine(38-40) synthase TruA from Methanococcus maripaludis S2

Subject, 251 a.a., pseudouridylate synthase I from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 47.8 bits (112), Expect = 2e-10
 Identities = 62/246 (25%), Positives = 102/246 (41%), Gaps = 35/246 (14%)

Query: 2   YIFKIAYDGKL--SFQTQPHGETVCDKISNALLDCGYLDNKDRVPLYHGGRTDRGVAALG 59
           Y  ++AY G     +Q QP+ +TV + I+ AL        +  V     GRTD GV    
Sbjct: 7   YFLEVAYKGTNYHGWQVQPNAQTVQEAINKALSTI----LRKEVDTMGSGRTDTGVHGKQ 62

Query: 60  NYVVY----EMDKKPVLPRVQSKLKWDGIWVLGCKKIEIFPEI------EHRHYQYTLPN 109
            ++ +    E+DK   L +  + L  D I +   +  E+ P+       E R Y+Y +  
Sbjct: 63  QFLHFDWKGELDKGLFLKKTNAVLPKD-ISLYDLR--EVHPDAHARFDAEWRSYEYHISL 119

Query: 110 KNH--------------DVELMKKASEKLIGTHYFQNLSKRDKTKVKDPVRTLYDIKISS 155
           + +              D+  M  A++ L+    F+  SK  KT+V      +       
Sbjct: 120 RKNPFEETLSWHCFYQLDIAKMNDAADLLLSHRDFECFSKV-KTEVNHFECEIKTAFWEQ 178

Query: 156 NDYFITIDIFGESFLWNMVRRIIRLLSDIGKHKIENPEKFIELILSEDYKKGYPPSPAEG 215
            D  +   I    FL  MVR I+  L ++GK +++    F  ++ S+D  K    +P  G
Sbjct: 179 KDQHLVFHITANRFLRGMVRAIVGTLVEVGKGQLD-LTGFQRILESKDRGKAGVAAPPHG 237

Query: 216 LILVDV 221
           L L  V
Sbjct: 238 LFLSKV 243