Pairwise Alignments

Query, 147 a.a., DMT family transporter from Methanococcus maripaludis S2

Subject, 321 a.a., Putative inner membrane exporter, YdcZ from Escherichia coli ECOR38

 Score = 46.2 bits (108), Expect = 5e-10
 Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 14/138 (10%)

Query: 7   LIFAIVVGFVASLQPIINSKLGEHIGSKNA-VFVNFIIGLVLIGLIILISD--------- 56
           ++  I+ G ++ +Q  +N +LG  +   NA   ++F  GLV++  II+            
Sbjct: 12  MLATILAGMLSPMQSAVNGQLGHWLQDGNACAVISFASGLVVMFFIIMARKETRQQFAAI 71

Query: 57  PSSIKQLSKVPAINPVYLLGGIMGVVIVLLSLIVVPELGALSAFSIFVGVQLISGALIDH 116
           PS IK   KVP  N      G+ G ++V         LG  +  +  +   L+SG L D 
Sbjct: 72  PSLIKN-RKVPLWN---WFAGLCGAMVVFSEGASASALGVATFQTALISALLLSGLLCDR 127

Query: 117 FGIFGIQKSPITLLKLFG 134
           FGI   +K   T  ++ G
Sbjct: 128 FGIGVDEKKYFTPYRIIG 145



 Score = 39.3 bits (90), Expect = 6e-08
 Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 3/109 (2%)

Query: 8   IFAIVVGFVASLQPIINSKLGEHIGSKN-AVFVNFIIGLVLIGLIILISDPSSIKQLSKV 66
           I   + G +A  QP  N+K+ E  GS   ++  NFI+G  ++G  + I        + ++
Sbjct: 171 ILPFLAGLLAGWQPAGNAKVAEATGSMLVSITWNFIVGFCVLGTALAIRVALGHVTV-QL 229

Query: 67  PAINPVYLLGGIMGVVIVLLSLIVVPELGALSAFSIFVGVQLISGALID 115
           P +  +YL GG +G++ + L  I+V  LG L         QL+   LID
Sbjct: 230 PDVWWMYL-GGPLGLMSIGLMAILVRGLGLLMLGVASTAGQLLGSVLID 277