Pairwise Alignments

Query, 351 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 286 a.a., Protein involved in stability of MscS mechanosensitive channel from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  108 bits (271), Expect = 1e-28
 Identities = 75/271 (27%), Positives = 137/271 (50%), Gaps = 15/271 (5%)

Query: 84  NLSLWLNESLTVAITFAGVLFLLKIVDDIIVNYVVPIVEKSENTLDDQLVPLMRKLVKFL 143
           N +L L+ ++ +    A ++  L IV  +I N V  ++      +D  +   +  LV++ 
Sbjct: 20  NQALLLSYAVNIVAAIAIIIIGL-IVARVISNTVNRLMRARH--IDATVADFLSALVRYG 76

Query: 144 ILIAGLMLILSNVGYNISALLAGLGIGGLAVALAAKDTIENLIAGFIIIVDRPFKLGDWI 203
           ++   L+  L  VG   ++++A LG  GLAV LA + ++ NL AG ++++ RPF+ G+++
Sbjct: 77  VIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYV 136

Query: 204 KWGGKEGIVEEVGIRSTRVRSFGDTLITVPNANIVQTEIENFSERRKRQVKATIGLTYDT 263
             GG  G V  V I ST +R+    +I +PN  I+   I N+S    R+ +  IG+ YD+
Sbjct: 137 DLGGVAGTVLNVQIFSTTMRAVDGKIIVIPNGKIIAGNIINYSREPVRRNEFIIGVAYDS 196

Query: 264 PVEKVKRAKEII----ENVLNDHHGVVDPIRVSFVEFGSFSLDLRVEYFVRDFGFDFFLN 319
            +++VK+    I    + +L D       + V   E G+ S++  V  + +        N
Sbjct: 197 DIDQVKQLLTTIIESDDRILKDRE-----MTVRLNELGASSINFVVRVWSKSSDLQ---N 248

Query: 320 TKDEINIKIKEEFEKENIEFAFPTQTVYYKK 350
              ++  +IK EF+   I F +P   V +K+
Sbjct: 249 VYWDVLERIKREFDAAGISFPYPQMDVNFKR 279