Pairwise Alignments

Query, 351 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 328 a.a., Small-conductance mechanosensitive channel from Alteromonas macleodii MIT1002

 Score =  115 bits (288), Expect = 2e-30
 Identities = 77/273 (28%), Positives = 144/273 (52%), Gaps = 10/273 (3%)

Query: 80  VLPDNLSLWLNESLTVAITFAGVLFLLKIVDDIIVNYVVPIVEK-SENTLDD-QLVPLMR 137
           +L + L  W+   +T+      V F + I   II   V  +  K    T +  Q+  L+ 
Sbjct: 12  LLSEKLESWVEGGITLLPNIV-VAFFIAIAFGIIAKVVGNVAGKIMRRTFESRQIASLLT 70

Query: 138 KLVKFLILIAGLMLILSNVGYN--ISALLAGLGIGGLAVALAAKDTIENLIAGFIIIVDR 195
            ++K ++LIAG+ + L  VG    +++LLAG GI GLA+  A +D  EN IAG  + + +
Sbjct: 71  SIIKSIVLIAGIFIALDFVGLKGTVTSLLAGAGIVGLAIGFAFQDMTENFIAGVAMGIRK 130

Query: 196 PFKLGDWIKWGGKEGIVEEVGIRSTRVRSFGDTLITVPNANIVQTEIENFSERRKRQVKA 255
           PF++GD I+  G  G V+E+ +R+T V +F   L  +PN  + +  + N+S    R+++ 
Sbjct: 131 PFEIGDVIEAEGVFGNVKEINLRNTLVETFYGQLEVIPNKILFRNILTNYSYLGYRRIEV 190

Query: 256 TIGLTYDTPVEKVKRAKEIIENVLNDHHGVV--DPIRVSFVEFGSFSLDLRVEYFVRDFG 313
            +G++Y    + ++ A ++I + +N+   V+  +   V    FG  S++L + +++R  G
Sbjct: 191 PVGISY---ADDIEEAAKVITDAMNEKDYVIKKEETAVYAESFGDSSINLLLWFWIRYPG 247

Query: 314 FDFFLNTKDEINIKIKEEFEKENIEFAFPTQTV 346
              F+  + +    +K   E+ +I   FP +T+
Sbjct: 248 EPGFMVVRHDAISTVKTVLEENDILIPFPIRTL 280