Pairwise Alignments

Query, 351 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 367 a.a., Small-conductance mechanosensitive channel from Alteromonas macleodii MIT1002

 Score =  117 bits (294), Expect = 4e-31
 Identities = 89/339 (26%), Positives = 181/339 (53%), Gaps = 23/339 (6%)

Query: 29  GKVMYIFLNKYVRVLAGKTKTKLDD--------VVLDAVEIPL---IIVVFVLFFKYGLN 77
           G V+ +F+ K + ++  K K + ++        V++ ++  PL   I V+F+L  K  ++
Sbjct: 20  GVVIVLFIVKRLILVRLKAKARSENSSMSDIYRVLVLSLNAPLNLLIWVIFLLLVKSIVS 79

Query: 78  NLVLPDNLSLWLNESLTVAITFAGVLFLLKIVDDIIVNYVVPIVEKSENTLDDQLVPLMR 137
              + D  ++   ++LT+ I  AG++  L +  +  V Y +    + ++T+      +  
Sbjct: 80  VFQIEDEGAI---KALTIVIE-AGLIITLFLFFERFVTYSLSRY-RDQSTIVKNTSAIAG 134

Query: 138 KLVKFLILIAGLMLILSNVGYNISALLAGLGIGGLAVALAAKDTIENLIAGFIIIVDRPF 197
             V+ L  +  +++ILS +G +++ ++A LGI  LAVALA + T+EN  +G  +++D+P 
Sbjct: 135 GAVRALFAVLAILIILSTMGVSVTPIVASLGITSLAVALALQPTLENFFSGIQLVMDKPI 194

Query: 198 KLGDWIKW-GGKEGIVEEVGIRSTRVRSFGDTLITVPNANIVQTEIEN-FSERRKRQVKA 255
           ++GD+I+   G++G VE++G RST VR   + ++ +PN+ +  +++ N +   R+  V  
Sbjct: 195 RIGDFIELDSGEQGFVEKIGWRSTWVRMLPNNIVIMPNSKLSNSKLINYYYPERELSVPV 254

Query: 256 TIGLTYDTPVEKVKR-AKEIIENVLNDHHGVVDPIR--VSFVEFGSFSLDLRVEYFVRDF 312
            +G+ Y + +E V+    E+   +L  H   V+  +  V F  F + S++L V    R++
Sbjct: 255 EVGVHYSSDLEHVENVCLEVANTILEQHEFGVETYQPFVLFHTFDNSSINLTVMLRTREY 314

Query: 313 GFDFFLNTKDEINIKIKEEFEKENIEFAFPTQTVYYKKE 351
              FF+  K      +K+ F++E I   FP   +  ++E
Sbjct: 315 FNRFFI--KSAFIKMLKKRFDEEGIVIPFPITALNLEQE 351