Pairwise Alignments

Query, 213 a.a., 50S ribosomal protein L1 from Methanococcus maripaludis S2

Subject, 230 a.a., 50S ribosomal protein L1 from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 57.4 bits (137), Expect = 2e-13
 Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 24/217 (11%)

Query: 9   AVKEARTLAKPRNFTQ---SVDLIVNLKELDLSRPENRLKEQIVLPSGRGKDVAIAVIAK 65
           ++ +A ++ K   FT+   SVD+ V L  +D  + +  ++  + LP G GK+V +  +  
Sbjct: 22  SLTDAASVVKDITFTKFDASVDIDVRLG-VDPRKADQMVRGIVTLPHGTGKEVKVLALVT 80

Query: 66  GDLAAQAEDMGLTVIRQEE-LEELGKNKKTAKKIANAHGFFIAQADMMPLVGKSLGPVLG 124
            D   +A + G   +  ++ ++++ K       I       I    +M  VG+ LG +LG
Sbjct: 81  PDKEEEAREAGADFVGLDDYIQKIEKGWTDVDVI-------ITMPAVMAKVGR-LGRILG 132

Query: 125 PRGKMPQPVPANANLAPLVARFQKTVAINTRD-----KALFQVYIGTESMSDDELAANAE 179
           PR  MP   P +  +   VA+  K V     D       +    +G  S S ++LAANA 
Sbjct: 133 PRNLMPN--PKSGTVTQDVAKAVKEVKAGKIDFKVDKFGIIHTSVGKVSFSAEQLAANAN 190

Query: 180 AI---LNVVSKKYEKGLYHVKNAFTKLTMGAAAPIEK 213
            +   LN +     KG Y +K+     TM  A  +EK
Sbjct: 191 EVIQTLNRLKPASAKGTY-IKSITLSSTMSPAVTVEK 226