Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 247 a.a., ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  277 bits (709), Expect = 1e-79
 Identities = 141/243 (58%), Positives = 179/243 (73%), Gaps = 1/243 (0%)

Query: 1   LIEMVNIHKKFKEAHVLKGVDLKVAKGEVLVIVGPSGSGKSTLLRCINGLEKTTEGHIFF 60
           LI++  +HK+F   HVL+ V  +   G+V VIVG SGSGKSTLLR +N LE   EG I  
Sbjct: 5   LIKVEKVHKRFGAHHVLRDVSTEFRTGQVTVIVGASGSGKSTLLRTLNRLEPHDEGRITV 64

Query: 61  EGDDITDKKVNINKIRQKIGMVFQQFNLFPHLTVLDNITFAPRKVLNVSKKEAEELAREL 120
           +G ++ D   +++ +R+++GMVFQQFNLF HLTVLDNIT APR++  + +K+AEE A EL
Sbjct: 65  DGIEVNDDHKSLDALRREVGMVFQQFNLFAHLTVLDNITLAPRRMRRIPRKDAEERAMEL 124

Query: 121 LKKVGLEGKENQYPIQLSGGQQQRVAIARALAMKPDAMLFDEPTSALDPELVKEVLDVMK 180
           L++VGLE    ++P  LSGGQQQRVAIARALAM+P  MLFDEPTSALDPE+VKEVLDVM+
Sbjct: 125 LRRVGLEAHARKHPFALSGGQQQRVAIARALAMQPRVMLFDEPTSALDPEMVKEVLDVMR 184

Query: 181 QLAYEGMTMVVVTHEMGFAKEVGDRLIFIDDGQILEDGNPSDVFSNPK-NERTKNFFGKI 239
           QLA  GMTM+VVTHEMGFA++V DR++F D GQI  D  P+  F N   N R K F  + 
Sbjct: 185 QLAASGMTMIVVTHEMGFARDVADRVMFFDQGQIAFDAPPAQFFGNDHGNPRIKAFLNRA 244

Query: 240 LSH 242
           + H
Sbjct: 245 VQH 247